Gene Plim_1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1041 
Symbol 
ID9137727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1316210 
End bp1317166 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content49% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003629082 
Protein GI296121304 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTG ACCTAACTCA TGAACGAGTT TGTGTGACAG GAAGCAGTGG ATTCGTTGGC 
CAACATGTTG TTCAGATTCT TAAACAACGA GGATTGTCGG AAAAGTCCCT GCTTCTGCCT
CGGCACAAAG ATTTCGATTT GACAGACGAG CGAGATGTTC AACAGATGTT TGCTGAACTC
CGACCATCGG TCGTAATCCA TCTGGCTGCC CTCGTCGGCG GGATTGGAGC CAATCGCAGT
CGCCCTGGTG AATTCTGTTA CGCAAATCTG GCGATGGGAT TGCATTTGAT TGAACAGGCA
AGAATACATC ATGTACAACG GCTTGTGCAC GTCGGAACTG TTTGTTCTTA CCCTAAGTTT
TGCCCAACAC CATTTTCCGA ATCACAGCTT TGGGATGGCT ATCCAGAAGA AAGCAACGCG
CCCTATGGCA TTGCAAAAAA GGCCCTGATC GTACTCTTGG ACAGTTATCG TCGTCAGTAT
GGTTTTTCCT CGGCCGTCGT TCTCCCCACG AATCTCTATG GGCCACACGA CAACTTTAAT
GAGGAGTCAT CACATGTTAT TCCTGCCCTT ATTCGGAAAA TGATTCACGC CCGCTCCACT
CACCAAAATG ACATTGAGAT TTGGGGCTCT GGAAAGGCCA CACGCGAGTT TCTTTATGTC
GCCGATGCTG CAGAAGGGAT TGTCCGAGCG GCCGAACGCA TTGATGATCC TTCGCCAATC
AATCTTGGTT CAGGGCAGGT GCTGACAATT CAGGACCTCG TTGAAGTTTT GGCAAAAGCT
TGTCGCTTTG ATGGTAACAT CAGTTGGAAT GCCACATATC CCGACGGACA ACCACAACGA
CATCTTGATT CCACGCGAGC AACTCAGCTT TTAGATTGGA AGGCCAGTAC ATCTCTTGAG
TATGGCTTGG AAACCACTGT CGAATGGTAC TGCCGTCAAG TTGGCTTACC ACAGTAG
 
Protein sequence
MNLDLTHERV CVTGSSGFVG QHVVQILKQR GLSEKSLLLP RHKDFDLTDE RDVQQMFAEL 
RPSVVIHLAA LVGGIGANRS RPGEFCYANL AMGLHLIEQA RIHHVQRLVH VGTVCSYPKF
CPTPFSESQL WDGYPEESNA PYGIAKKALI VLLDSYRRQY GFSSAVVLPT NLYGPHDNFN
EESSHVIPAL IRKMIHARST HQNDIEIWGS GKATREFLYV ADAAEGIVRA AERIDDPSPI
NLGSGQVLTI QDLVEVLAKA CRFDGNISWN ATYPDGQPQR HLDSTRATQL LDWKASTSLE
YGLETTVEWY CRQVGLPQ