Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1041 |
Symbol | |
ID | 9137727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1316210 |
End bp | 1317166 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003629082 |
Protein GI | 296121304 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTTG ACCTAACTCA TGAACGAGTT TGTGTGACAG GAAGCAGTGG ATTCGTTGGC CAACATGTTG TTCAGATTCT TAAACAACGA GGATTGTCGG AAAAGTCCCT GCTTCTGCCT CGGCACAAAG ATTTCGATTT GACAGACGAG CGAGATGTTC AACAGATGTT TGCTGAACTC CGACCATCGG TCGTAATCCA TCTGGCTGCC CTCGTCGGCG GGATTGGAGC CAATCGCAGT CGCCCTGGTG AATTCTGTTA CGCAAATCTG GCGATGGGAT TGCATTTGAT TGAACAGGCA AGAATACATC ATGTACAACG GCTTGTGCAC GTCGGAACTG TTTGTTCTTA CCCTAAGTTT TGCCCAACAC CATTTTCCGA ATCACAGCTT TGGGATGGCT ATCCAGAAGA AAGCAACGCG CCCTATGGCA TTGCAAAAAA GGCCCTGATC GTACTCTTGG ACAGTTATCG TCGTCAGTAT GGTTTTTCCT CGGCCGTCGT TCTCCCCACG AATCTCTATG GGCCACACGA CAACTTTAAT GAGGAGTCAT CACATGTTAT TCCTGCCCTT ATTCGGAAAA TGATTCACGC CCGCTCCACT CACCAAAATG ACATTGAGAT TTGGGGCTCT GGAAAGGCCA CACGCGAGTT TCTTTATGTC GCCGATGCTG CAGAAGGGAT TGTCCGAGCG GCCGAACGCA TTGATGATCC TTCGCCAATC AATCTTGGTT CAGGGCAGGT GCTGACAATT CAGGACCTCG TTGAAGTTTT GGCAAAAGCT TGTCGCTTTG ATGGTAACAT CAGTTGGAAT GCCACATATC CCGACGGACA ACCACAACGA CATCTTGATT CCACGCGAGC AACTCAGCTT TTAGATTGGA AGGCCAGTAC ATCTCTTGAG TATGGCTTGG AAACCACTGT CGAATGGTAC TGCCGTCAAG TTGGCTTACC ACAGTAG
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Protein sequence | MNLDLTHERV CVTGSSGFVG QHVVQILKQR GLSEKSLLLP RHKDFDLTDE RDVQQMFAEL RPSVVIHLAA LVGGIGANRS RPGEFCYANL AMGLHLIEQA RIHHVQRLVH VGTVCSYPKF CPTPFSESQL WDGYPEESNA PYGIAKKALI VLLDSYRRQY GFSSAVVLPT NLYGPHDNFN EESSHVIPAL IRKMIHARST HQNDIEIWGS GKATREFLYV ADAAEGIVRA AERIDDPSPI NLGSGQVLTI QDLVEVLAKA CRFDGNISWN ATYPDGQPQR HLDSTRATQL LDWKASTSLE YGLETTVEWY CRQVGLPQ
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