| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1021 |
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| Symbol | |
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| ID | 9137707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 1289580 |
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| End bp | 1291868 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | exporter of the RND superfamily protein-like protein |
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| Protein accession | YP_003629063 |
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| Protein GI | 296121285 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.119734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTCGA CCCTGTATGC TCGCTACTAC AAACACATGT TGTGGTTCGT TGCGCTCACA
TTGCCCCTGT TCTGGTATCA GGCCGAGTCG ATCAAGTCGA ATAACGATAT CGAAACCTGG
ATGCCCCGGG ATACCGGTGT CCGCCAGATC TACGAACAGT TCAAGCTCGA CTTTGGTGCT
GAAGAAGTCA TTCTGATCGG TGCCAGCGCC AAAGAACTTT CGAACGACGC GATTGAAGCA
CTTGCGGGTC GATTAGAGCG TTTGCCAGGC ATTCGCTCCT GCTGGACGCC GGGACGACTG
GCTTATCGCA TGGAGGCCTT AGGCGTCTCT CCCGAAGAAG CTCATGCCCG GCTCGAAGGC
TTATTGACCA ACCCTGATAA AGATATGGTC GGGCTCTCGG CGGTCCTTTC GGAAGCCGGG
ACAAAAGACC GCGCGGGCAC AGTGGCTCAG GTTCGCGAAG TTCTTAAGTA TTGTCAGCTC
AATTCGGCGC ATGTGGCACT CACGGGGGCC CCTGTCATTG TGACCGAGCT GGATACACTC
GGTAATGCGA AATCTGGCCG TAAGTTCTTT GCGATTACGT TAGCGATCTG CCTGGGGTTA
CTTTACTTCT CGCTGAGGCA TTGGAATTTG TCTCTGGGAA TTCTCGGTGT GACCTTATGG
GGGATTTTCC TGACTCAGTC GATCATCGCC TGGTGTGGCG GCGAGATGAA CTTTATTCTC
GGTTCACTCT CCGTCCTCGT GATGATCTTT ACGCTCTCGA TCGCAGTGCA CTTCGTGAGC
TACTATAGCG ATGCGGTTGC CTCGGGTGAG GCTAAGCCAC TCGACCATGC CTTTAAGGCC
TCGTTTAACC CTTGTTTTCT CTCGACTCTG ACAACATTGC TGGGCCTGGT TTCGCTGAAT
GTCAGCAGTA TTCTGCCTGT GGCGCAATTC GGCTATGCCG CAGCGACTGG TGCTGTGGTC
GCGATGGTTG TCGGCCTGGG CCTGACACCG GCTCTCTTGA TGGTCTGGCC AGATTGTGCT
GTGAAGTCCT TCCGCATCCA TCACGTTGAT TTCGACTGGT GGGGACACTT CGTCAATCGA
CATCGTCATG GCATTCTGGC TGTGGCTACT GTGATGCTGT GTGTCGCCAT GGTCGGGATT
GTTCGTCTGC GGCCCGATGT GGATCCGGTG GACTTTCTGC CCCGAGACAG CCAGGTGCTG
GTCGATCTCG GACGGGTTGA AAAGAAGCTG ACTAATGTCG ATTCGATTGA AGGGGTGGTC
GATTTCACCG GGAAGAATCT CACCTTTGTC GATCAACTGC AGATTGTCAG AGAGTTGGAA
GCCGTCCTGC GGCAACAGCC GGGCGTGCGG CATGTGTTGA GTCTGGCGAC ATTCTTCCCC
AATGAACTTC CGGATGGGGC TCTCGCGACT GCCCGGATGT TTTCCACTGC ACGCAGCTAT
CAGGGTGAAG ATGGTCTGAT CGCTGCCGAT CAGCAGTTGT GGCGAGTTTC GATACGAGTG
GAAGACAACG CGATTGTCGG CGGTGGTGCC GATCGTGTGC TGCATAGTAT TCAACAAAAA
ACTGCCGGCT TTCCTGTGCA TTTCACGGGG ATGACTCCTC TATTAGATAG TGCCCAGAAG
GAGATTTTCA GTGGTTTCTG GGAGAGCTTT ACTGCGGCAG TTCTGACCAT CAGCCTGGTC
TTCCTGATCT CGCTGAGATC GTTCGTGGGT ACCTTGATTG CGATGGTGCC GAATATTGTC
CCCATTTGGC TGGTCTTCGG CTCGGTGGGC TTTTTCGGGA TGCCGGTCGA TATTGGCATG
ATGATGACGG GGAGTATTGC CCTGGGTATT TCGGTCGATT GCACGTTCCA CTTTATGGTG
CAGTACAATC AGGCTGTCAA ACTGGGTGCC ACTCCATCTG AAGCAGTACG TATTGCACTG
CAGCATTCGG GCGAACCAAT GCTCGATTCG ACTTTGATTT CGAGCACAGG GATGCTGGCA
CTCTGCCTCA GCAGCTTTGC TCCGACGGCT CGGTTTGGCT GTCTCATGTC GGCCCAGATG
ATTGCTTCGA TTCTGGGGGA ACTGGTCTTT CTCCCGGCAC TTCTCTGTTG TCTGCCAGAA
AAACGCAAGG CAACGAACAC TTCTGCAGCG TCAGAAGAGT CAGCAGAAAG CTCTGCGACG
CCTGGCGACT TGGCACACGA TGAGATCGAG CCGCAGATTC ATCGCCTCCC GGCACCGGCA
CCACATATCG GGCACATCGG CCGAGGAGCA AAAGCGCCAC GACGAGCCGA CAGCTCGTTC
CTCAACTAG
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| Protein sequence | MISTLYARYY KHMLWFVALT LPLFWYQAES IKSNNDIETW MPRDTGVRQI YEQFKLDFGA
EEVILIGASA KELSNDAIEA LAGRLERLPG IRSCWTPGRL AYRMEALGVS PEEAHARLEG
LLTNPDKDMV GLSAVLSEAG TKDRAGTVAQ VREVLKYCQL NSAHVALTGA PVIVTELDTL
GNAKSGRKFF AITLAICLGL LYFSLRHWNL SLGILGVTLW GIFLTQSIIA WCGGEMNFIL
GSLSVLVMIF TLSIAVHFVS YYSDAVASGE AKPLDHAFKA SFNPCFLSTL TTLLGLVSLN
VSSILPVAQF GYAAATGAVV AMVVGLGLTP ALLMVWPDCA VKSFRIHHVD FDWWGHFVNR
HRHGILAVAT VMLCVAMVGI VRLRPDVDPV DFLPRDSQVL VDLGRVEKKL TNVDSIEGVV
DFTGKNLTFV DQLQIVRELE AVLRQQPGVR HVLSLATFFP NELPDGALAT ARMFSTARSY
QGEDGLIAAD QQLWRVSIRV EDNAIVGGGA DRVLHSIQQK TAGFPVHFTG MTPLLDSAQK
EIFSGFWESF TAAVLTISLV FLISLRSFVG TLIAMVPNIV PIWLVFGSVG FFGMPVDIGM
MMTGSIALGI SVDCTFHFMV QYNQAVKLGA TPSEAVRIAL QHSGEPMLDS TLISSTGMLA
LCLSSFAPTA RFGCLMSAQM IASILGELVF LPALLCCLPE KRKATNTSAA SEESAESSAT
PGDLAHDEIE PQIHRLPAPA PHIGHIGRGA KAPRRADSSF LN
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