Gene Plim_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1004 
Symbol 
ID9137690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1272004 
End bp1272900 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF323 
Protein accessionYP_003629046 
Protein GI296121268 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.302602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC GACAGTTTTA TCTCTGGAAT AGTGTGATTC TTGCCAATCT GATCTTTAGT 
GTGGTGTTAG TCGCTCCAGT GGACGCACAG ACGTTGACCA CACCTTCCTC CCTTGAGTCC
CCGTTCACAG CTGATGGAGC CAAAGCCGGT CAGGAGGCAT GGGCCAAGCA TCTGGGGAAG
TCTGTTGTTG AGAAAAATAC AATCGGCATG GATCTGGTGT TGATTCCCCC AGGTAAATTT
CGCTTGGGAA GTCCCCCCGG TGAAAATGGT CGTGATACCG ACGAAAAACA GGTCGACGTA
ACGCTCACCC AGCCCTTCCG GCTGGGCCGC ACGGAAGTGA CCCTGGGACA GTGGAGGCAG
GTGATGGGAA CCATTCCCTG GAACCGAGAA AACTTCATCA AAAAAGGGCC AGACTATCCT
GCGACATTTG TCAGCTGGGA GGATGCCCGG GCGTTTTGTG AGAAGTTGAG TCAGATAGAA
GGCAAGACAT ATCTGTTACC GACGGAAGCC CAGTGGGAGT GGAGTTGCCG GGGAGGCACG
ACAACCCGGT TCTCGATCCC CAATGAGAAG TATCTCACGG AATACGCATG GTTTAATGAT
AATGCCGCCG ACGAAAAGTA TGCCCACCGC GTGGGCCTAA AGCGGCCCAA TCCGTTTGGC
CTGTCCGACA TTCATGGGAA CGCATGGGAA TGGTGTCAGG ATTGGTACGG AGAAAGATAT
TCCATAATTA GTTCGATCGA CCCGTGTGGC CCATCGTCTG GGAGTGATCG TGTGATTCGC
GGTGGGAGTT GGGACAGTAT CACGAGGGGC ATTCGCTCGG CTGAACGCGG CGGGGGCTCG
CCAGACGCCG GGAGCTACCT CGTCGGTTTC CGTGTATCGA GGATTGAATT ACCCTGA
 
Protein sequence
MSERQFYLWN SVILANLIFS VVLVAPVDAQ TLTTPSSLES PFTADGAKAG QEAWAKHLGK 
SVVEKNTIGM DLVLIPPGKF RLGSPPGENG RDTDEKQVDV TLTQPFRLGR TEVTLGQWRQ
VMGTIPWNRE NFIKKGPDYP ATFVSWEDAR AFCEKLSQIE GKTYLLPTEA QWEWSCRGGT
TTRFSIPNEK YLTEYAWFND NAADEKYAHR VGLKRPNPFG LSDIHGNAWE WCQDWYGERY
SIISSIDPCG PSSGSDRVIR GGSWDSITRG IRSAERGGGS PDAGSYLVGF RVSRIELP