Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1002 |
Symbol | |
ID | 9137688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1267815 |
End bp | 1269917 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | protein of unknown function DUF214 |
Protein accession | YP_003629044 |
Protein GI | 296121266 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.95364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCGGC GCTGGCAGTT TTACTTACGA CTCGGCTGGC TTGATCTGGT TCGCTTGTGG CCGACAACTA GGCATCACGC CATCATTGTC GCCGGAATCT GCCTGCCGAT TCTCATGTTG CTGGGAATCA AACGCGGGCA TGTAGCCGAA TTGCGTCGCG ATCTCGTGAC CAGTCCGATC GGACGGCAGG TCACCTTCTG GTCGGCTCGC AAGGGCGAGC TGATGGATCG TACTGCCGTT GCCCGTCTCA GTAGTGAGCT GCCATCAGTC GAAGTCATCA TTCCCGAAAT TCAGCGTGTC GTCAGATTAT CTCGGACTGA GTCGATCTCT TCCGCTTCAT CGCCAAACGA GGAAATGGGC ATTTCCGCCA CACTCTATGC CACCCGCCCG GGCGATCCGA TGCTGGCTCA ACTCGGGATA GCAGCACCTG CGGCAGGTGA GCGCTCGATT GTGCTGGGAG AAGGACTGGC CCGGCGGCTG CAAGTCGGCG CAGGTCAACA GGTCGATCTC CATCTGACGC GCGGTCGCGA TCATCAGGAA GAACAAGTCT CACTGACCTG TACCATCCTG GCTGTGATGC CCACCGAGCA ACAGGATGCC GCCATCGGCT ACCTCGACCT CGACCTGCTC GACGCCTGCG AGCAGTTCGT GCGCGGTCAA CGGGTGGAGT CCTTGAACTG GCCCAGCGCC CGCACTCCGG CACGCGACGG CTATTCGAGC TACCTCATCT TCTGCGAACG CGAGAACGAC CTGACAGAAG ACGATCGCAA GTTTCTCGCC GATCGAGGCT TCTTATTGAC AGATCGAACG GCTGAACCAC CCACTCCGCT CGACAGGTTG CTCGCACCCG GCTCGCGAGA AGAGCTGCGG ATCTATGAAG CTGCGACGAC TCAAACCAGC CAGCGCCCAG AACCGCGTCT ATTCTTTGCA CCATCTGAAC TCAGTGAACA GACGACTGCC GACGATGTCA TCCTCCCTTG GAACCCACCC GCCAGTGCCG AACACGAAGG TCGCCCATGG ATATTAGCCG GTCTCTCTCT GCCACGAAGA ACATGGCTGC GTGAGTACTT CGTTCAGGCC GATTTGCCCT TCGATTACGA TGCCGAACCG TTTCAGGCGC GGACACTCGC ACCGCTGGAA CCGATCTCGC TGGTCTGCCT GCTCGACGCG AAGCAACGTC TCGCCATTCC CTGCGTTGGT AGAAATAGCT CTTCTTCGGA AACACTCACA TCACCCGCTG AGTCTCCCTC GGACGCATCA CCTCCCGGCG ATTCCTCAAC CGAACCAATC GCTCCCGCCA GTGACCTGAA TCCTGCCAGT GCCCTCGCTC CCGCCAGTGC TCTCGCTCCC GCCAGTGCTC TCGCTCCCGC CAGTGCCCTC ACTCCCGACA ATATCACGAC AAACAATCGC CAGGCCTCTC CCGGTTTACC CGACATTGCC ATCGTACCAG CGAACCTTAC CGCGTGGCTC GCGGCTTATC GCGCCAGCAT GGCCGTCTAC GACCCGACGA TTCAACTCTT TGTACCGTTG CCACAGTCAC CTGTGTACGA CCGCGCCCGG CTTTACGCCC GCACCATCGA CGATGTCCCC GCCGTGGTCT CGGCGCTCTC GAACCAGCAG TTTGCCGTCA TGTCCGAGAC AGGCCGCATT GCCGAGATTC ATCGCCAGGA CCGTTCCCTG CAACTGCTGG TGTGGGTGGT CGGCATTGGA GTCTTCCTGT TCGGCATCGT GACTGTCGTC AGCGTGTTGA TGGATTCGAC CGACCGCAAG CGAGGCACAA TCGGCATTCT GCGTGTGATG GGTGTCTCAC CTTGCGGCAT CTTTGTGTCG ATCCTGCTCC GATCAGCCAT GATCGGTCTC TTCGCTGCCG CCTTAAGTCT GGCCTGTGGC GTGGGATTGG CCATAGCTCT TGAATGGCAA CCCGCTTCGA CAGCCCACTG GTTGAGCTGG AAACCGGTCG TCCATATTGA GTTGCATCCC TGGGACATGG CCATTGTCGC AGCCGGTGCA TTGCTCTGTT GTGGCCTTGG TTCGCTTCCT CCCGCGTGGC GAGCCAGCCG TCTCGATCCA TTCGATGCCA TCGTCGAAGG TCGCTTTCGT TGA
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Protein sequence | MMRRWQFYLR LGWLDLVRLW PTTRHHAIIV AGICLPILML LGIKRGHVAE LRRDLVTSPI GRQVTFWSAR KGELMDRTAV ARLSSELPSV EVIIPEIQRV VRLSRTESIS SASSPNEEMG ISATLYATRP GDPMLAQLGI AAPAAGERSI VLGEGLARRL QVGAGQQVDL HLTRGRDHQE EQVSLTCTIL AVMPTEQQDA AIGYLDLDLL DACEQFVRGQ RVESLNWPSA RTPARDGYSS YLIFCEREND LTEDDRKFLA DRGFLLTDRT AEPPTPLDRL LAPGSREELR IYEAATTQTS QRPEPRLFFA PSELSEQTTA DDVILPWNPP ASAEHEGRPW ILAGLSLPRR TWLREYFVQA DLPFDYDAEP FQARTLAPLE PISLVCLLDA KQRLAIPCVG RNSSSSETLT SPAESPSDAS PPGDSSTEPI APASDLNPAS ALAPASALAP ASALAPASAL TPDNITTNNR QASPGLPDIA IVPANLTAWL AAYRASMAVY DPTIQLFVPL PQSPVYDRAR LYARTIDDVP AVVSALSNQQ FAVMSETGRI AEIHRQDRSL QLLVWVVGIG VFLFGIVTVV SVLMDSTDRK RGTIGILRVM GVSPCGIFVS ILLRSAMIGL FAAALSLACG VGLAIALEWQ PASTAHWLSW KPVVHIELHP WDMAIVAAGA LLCCGLGSLP PAWRASRLDP FDAIVEGRFR
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