Gene Plim_0922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0922 
Symbol 
ID9137607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1179810 
End bp1180901 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content55% 
IMG OID 
Productpeptide chain release factor 1 
Protein accessionYP_003628965 
Protein GI296121187 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.276919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCC GCATGTTCCC CACACTTCAG GCCAAGCTCG CACGCTTCGA AGAGCTGGAA 
GCACAACTTC AGGATCCGGA AGTGCTGGCG GATGTCAGCA AGATGCTGGA AATTCAGCGA
GAGCACGGAG GCTTATCAAA AATTGCCTCG ACCGTTCGTG AATTCAACAC CTTGCAGGAC
GATCTGCTCG CTGCAGAAAC CATGCTGGCG GAAGCCACCG ATGATGAAAC CAAAGAGATT
GCGCAAGCCG AAATCGATGA ACTGAAGCCC CGCTTCGAAC CACTGAAGAC CGAACTCGAA
GACATGGTGA CCGCCGGCGA TTCGCTCACT CGCGGCAGCC TGATCATGGA AATTCGTGCG
GGAACAGGCG GAGATGAAGC CGCTCTGTTT GCCCGCGATC TCTATGAAAT GTACACCCGG
TACGTCGATC TCCAGGGCTG GAAATACGAA GTCATGGAGT TAACCACGTC CGAACTGGGT
GGTCTTAAGG AAGTCGTAAT CACCATCACC GGTTCCGGCG CCTATCACCG CTTACAGTTT
GAAAGTGGCG GGCATCGTGT CCAGCGTGTT CCGGAAACGG AAACTCAGGG CCGTGTCCAC
ACCAGTGCTG CGACAGTCGC CGTCATGGCG GAAGCCAGTG AAATCGATGT CGAGATCCGT
GATGAAGATC TTCGAATCGA TACCATGCGT GCCGGCGGCC CCGGTGGTCA AAAAGTGAAT
AAGACCGAAT CCGCCGTGCG TATTACCCAC ATTCCCTCGG GCTTGGTGGT GCGTATTCAG
GATGAAAAAA GTCAGCACAA AAACAAAGCC AAAGCACTGC GCGTCCTGCG ATCCCGGCTC
ATGGAATTAA GGGAGTCTCA GGCTCATGCA GTCCGGGCCG AACAGCGGCG AACTCTCGTG
GGGTCTGGTG ATCGAAGCGA ACGCATCCGC ACGTACAACT TCCCTCAGAA CCGCCTCACA
GATCATCGCA TCGGCCTGAC CGTTTACAAA CTCGATCAGA TCATGCAGGG AAATCTCGAT
GAGCTGATCA ATCCGATTCT GGCGTTCGAT CGCGAAGAAC GCCTCAAGGG CAATGTGGCG
CCCAGTAATT GA
 
Protein sequence
MTTRMFPTLQ AKLARFEELE AQLQDPEVLA DVSKMLEIQR EHGGLSKIAS TVREFNTLQD 
DLLAAETMLA EATDDETKEI AQAEIDELKP RFEPLKTELE DMVTAGDSLT RGSLIMEIRA
GTGGDEAALF ARDLYEMYTR YVDLQGWKYE VMELTTSELG GLKEVVITIT GSGAYHRLQF
ESGGHRVQRV PETETQGRVH TSAATVAVMA EASEIDVEIR DEDLRIDTMR AGGPGGQKVN
KTESAVRITH IPSGLVVRIQ DEKSQHKNKA KALRVLRSRL MELRESQAHA VRAEQRRTLV
GSGDRSERIR TYNFPQNRLT DHRIGLTVYK LDQIMQGNLD ELINPILAFD REERLKGNVA
PSN