| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0893 |
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| Symbol | |
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| ID | 9137578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 1142698 |
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| End bp | 1144431 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003628936 |
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| Protein GI | 296121158 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAAT CACAACTCGC ACTTCGTGAA CTGCTGAATC AGGGCGCCTC GCGCGGCTTT
CTGACGTACG CGGAAATCGA CAGGTACATC CCTGATGAAG GGGGTGATCC TGCCCTCGTT
GACGAACTCA TCATGGCCCT TGAGGCTGCC GGTCTCGATG CCGTTGAGCC TGAGGGTGGT
ATTGATCCAC TGCAATCGTT GCCTCCGCTG GAAATGCTTG AGCCGGAATC CAACTCCAGC
TCGCGTGATC CGATTCGCAT GTACTTGAGC CAGATGGGCC ACATCCCCCT GCTGACACGC
GAACGGGAAA TCTACCTGGC CAAACAAATC GAAATGACTC GCCGCTGGTT CCGCCGACGC
ATGCTCGAAT CCGATTTCGC GATTCGCATT GTTGTCGATA CGGTTCACAA AGTCCGGCTC
GGGGAACTTC CCTTTGAGCG CACATTGCGG ACTTCAGATA CCGAAAGCGT TCAGAAAGAT
CAGATTCTGG CTCGTATGCC TCACAATCTG CCGACCATTG AGCGCATGCT CGATGAGAAC
AAGCAGGATT TCACACTCCT TCGAGCAGCC ATCGGGACTC CCGAAGAAGC CGTCATTCGC
GAACGCATGG CCATTCGTCG CAGCAAGCTG GCCACCCTCT GTGAAGAACT CAGTGTCCGC
ACACAAAGGC TCCAGCCTGT CATGCGGCGT ATGGAACAGA TCTCGCTTCG GATGACAGAA
CTCCAGAAGC AGATTTCTGC CCGCCAGATT CGCAAGATGC CGATGACAGC CGCTGACGTG
GCTGCCGCTG AAGCCGAACT GGAAGGGTTG ATTCAGGATG TGCAGGAACT GCCAGCCGAT
TTCCAGAAGC GCATTCGCCG AGTTCTCGAA AAATTTGGTG GCTGGACACG TTCCAAGCAG
CAGCTTTCTG GCGGTAACCT CAGGCTGGTG GTCTCGATTG CCAAGAAGTA TCGCAACCGG
GGCCTGAGCT TTCTCGACCT GATTCAGGAA GGAAATGCCG GTCTGATGCG TGGTGTCGAG
AAGTACGAAT TCCGCCGTGG TTATAAGTTC TCCACCTACG CCACATGGTG GATTCGTCAG
GCGATTACCC GTGCCGTTGC CGATCATGCC CGGACGATTC GTATTCCAGT CCACATGTTC
CAAAGCATTT CCACGCTGAA GAACAAGAGC GAACAGATCC GCCAGGAAAC AGGTCGCGAG
CCAACCATCG AGGAGCTGGC ACTGGCCGTC GATATGTCGG TCGAAGATAC CGAACGAATC
ATGAAGACCT GGAAGCACCC GATGAGTCTC GATACACCGA TCGGTGAAAG CGAAGACTCC
AGCTTTGGTG ATTTCCTGGA AGATAGTCAC GAATCGACTC CAGCCGACAA CGCCCTGCGT
GAAATGCTGC GGGATAAGAT CGATATCGTG CTCCGCAGCC TGACGTATCG CGAACGGGAA
ATCATTCGTT TGCGTTACGG CCTGGGCGAC GGCTACAGCT ACACTCTCGA AGAAACGGGC
CGAATTTTTA AGGTCACTCG CGAGCGTATC CGCCAGATTG AATCGAAGGC TCTCAAGAAG
TTGCAGCACC ACACGCGTGC TCATCACCTG CAAGGCTTCG TGGAAGATCT CCTTCCGAAC
CCTGCTGCCC CCGGTGCACT GCTGAACTCG GATACGATTC TTTCTGAAGA ATCGAAAAGT
TCACCTGCAG CACGTCGGCG CAAAGACTCC ATGACACTCG CGGCAGCCAA CTGA
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| Protein sequence | MDQSQLALRE LLNQGASRGF LTYAEIDRYI PDEGGDPALV DELIMALEAA GLDAVEPEGG
IDPLQSLPPL EMLEPESNSS SRDPIRMYLS QMGHIPLLTR EREIYLAKQI EMTRRWFRRR
MLESDFAIRI VVDTVHKVRL GELPFERTLR TSDTESVQKD QILARMPHNL PTIERMLDEN
KQDFTLLRAA IGTPEEAVIR ERMAIRRSKL ATLCEELSVR TQRLQPVMRR MEQISLRMTE
LQKQISARQI RKMPMTAADV AAAEAELEGL IQDVQELPAD FQKRIRRVLE KFGGWTRSKQ
QLSGGNLRLV VSIAKKYRNR GLSFLDLIQE GNAGLMRGVE KYEFRRGYKF STYATWWIRQ
AITRAVADHA RTIRIPVHMF QSISTLKNKS EQIRQETGRE PTIEELALAV DMSVEDTERI
MKTWKHPMSL DTPIGESEDS SFGDFLEDSH ESTPADNALR EMLRDKIDIV LRSLTYRERE
IIRLRYGLGD GYSYTLEETG RIFKVTRERI RQIESKALKK LQHHTRAHHL QGFVEDLLPN
PAAPGALLNS DTILSEESKS SPAARRRKDS MTLAAAN
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