Gene Plim_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0885 
Symbol 
ID9137570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1132092 
End bp1132601 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content52% 
IMG OID 
Productprotein of unknown function DUF1568 
Protein accessionYP_003628928 
Protein GI296121150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCAC GTCGAGTGGA TGACGCCCCG TATGTCCACT TCGTTACGCT TTCCTGCTAC 
CATCGCCGAA AACTGCTGAC AAGAGACCAA CCGAAGCGAA TCCTGCTTGG AGTATTAGCA
GACGAACTGG AGCGACATCA GGCGCGCTGT GCCGGATTCG TGATCATGCA GGATCATGTG
CATATCCTGC TGTGGCTTCC TGTAATTCAG CAACTCAGTC GGTTCATGCA ATTGTGGAAG
GGGCGATCAT CACGCAATAT TAAGAATTAC TTCGCTGAAT CCGCGCCGGC GTATCAATCG
GAGATATCTG CCCGTGATCC GATCTGGCAG GTACGATATT ACTCATTTGA GATCTACTCG
GATCAGAAGT TACAGGAGAA GCTGCAGTAT TTACATCTCA ATCCCGTACG TGCCGGACTG
GCAAAGAAGG CCGTGGATTG GCGATGGAGT TCGGCTCGCT GGTACGAACA GGGACGAACA
GTGGGCGTGC CCATTTCGTG GGTGCAATAA
 
Protein sequence
MKPRRVDDAP YVHFVTLSCY HRRKLLTRDQ PKRILLGVLA DELERHQARC AGFVIMQDHV 
HILLWLPVIQ QLSRFMQLWK GRSSRNIKNY FAESAPAYQS EISARDPIWQ VRYYSFEIYS
DQKLQEKLQY LHLNPVRAGL AKKAVDWRWS SARWYEQGRT VGVPISWVQ