Gene Plim_0883 details

Gene Information

• Locus tag: Plim_0883
• ID: 9137568
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 1129007
• End bp: 1131055
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 57%
• Product: hypothetical protein
• Protein accession: YP_003628926
• Protein GI: 296121148

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.888299
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAT TTCCGGCTGA CTCTGTGCTG GTTCCATCTG CCCGGCTGTT GTGTGTGGCA 
TTGGTCCTTT CAAGCCTCGC CTGGGCTGAT GGGCCGGGCG ATAATCAGGT GCAGAGTGTG 
CGACCAGTCC CACCCCCCGG GATTTCCATC GATCCTGCCA TTCGTGCCGA ACTGGAAGCG 
GGCCTCAAAC AACTCGAAGA GAAGTTTAAG CTTCTCAAGG AGAAAGCCGG CAAGGATAGC 
TTCACAGCTC GGTACCTTCC CGATGTCGAG ATCTTCCCGC GAGCAATCAG GCTGGCACTC 
GAAGAGGGAA CCTTCTACGA CGCCAAAGAA TTCCAGCAGG CCAAAGATGT CCTCGCTGAA 
GGGATGACTC GGGCCGAAGA ACTTGCCGCC GGTAAAGCCA GCTGGGCCAC GCGTACGGGC 
CTTGTGGTCC GCGGATTTCG ATCGCGTCTG GATGGGACAG TACAGCCTTA CGGCGTGGTC 
GTTCCCGCCA GTTACAATGC CGACAATCTG CATCGCTGCG ATCTGTGGTT TCGCGGGCGT 
GCTGAAAAGA CGCCCGAGCT GCAGTTCATC TATCAGCGCA GCCGGCAGGC GGGAGAGTAC 
ACGCCGGCGC GAACAATCGT GGTCCATCCC TTTGCCCGCT TCTGCAATGC CAACAAACTG 
GCTGGCGAAG TCGATTCTCT GGAAGCGCTG GAGCATGCCC AGAGCCACTA TGCCGTCGAT 
CCGGATCGGA TCTCGATTCG TGGTTTTTCG ATGGGTGGCG CCGCGGTCTG GCATCTGGCA 
GTCCATTATC CTGATCGCTG GTTTGCTGCC AATCCCGGGG CAGGATTCTC GGAGACGCCA 
TTGTTCCTCA ATGTCTTCCA GCAGGAAAAG CTGGCTCCTT CCGAATTTGA GCAAACCCTC 
TGGAAGCTCT ACGACGCGCC TTATTGGGCA CTGAACCTGA AGAACCTGCC CACCATTGCC 
TACAGCGGCG AAATCGACAA ACAGAAGCAG GCGGCGGATG TCATGGAAGC CGCCATGGCG 
AAACTGGGGG ATCGACTGGT CCATATCATC GGCCCGCAAA CCGCCCACAA GCTGCATCCT 
GATTCGAAAG TGGAGATCGA GAAGCGGATG GCTTCACTGG CAGTCGCAGG GCGAAATCGA 
GTCCCCGAGC GAGTCCATTT CACGACGTGT ACGCTCAAAT ATGACCGTAG TTTCTGGGTG 
CGGGTGACGG GACTGGAAGA GCATTGGACG TTTGGAACGG TGGACGCCAC GCTGATTTCT 
CCCGGCGGGA TTCGCATTCG ATCTGAGCGG GTCACCGACC TCGAATTGAA CTTCGAGGCG 
GGAGCTTTCC CATTGATCAA TCAGAGCATT GTCGTTGAGT TCGACGGAAA GAAGCCACAG 
AGTCTTTCCG TCCCCGGTCG GATGTCGGAT GGCTCGTGGA TGGCTCAATT CCACCAGGTG 
AACGGGTTGT GGAAAGCCGG CCCCCGCCCT GTGGAGGGCT TGAGAAAATC CCACAATCTG 
CAAGGCCCGA TTGATGACGC TTTGATGGAT TCGTTTGTGT TTGTGCTTCC TTCGGGAAAG 
AGTTCCAGCC CGGTGGTGGA GGCGTGGGTG CAGAGTGAAG CAGCCCGTGC CCAGAAAGAA 
TGGCAGCGGC AGATGCGGGG TGAAGTTCGA GTGCTGAAGG CCGATCAGGT GACGCCAGAG 
GTCATGAAAA ACTCGCACCT GATTCTGTGG GGCGATGAAC AAAGCAATCC GCTCATTGGC 
CAGTTGGCCT CCCAGTTGCC AATCCGCAAA ACAGGCACGA ACTGGACTGT GGGGAATTCC 
AAGTTCTCCG ATACCGACCA TCTGCCCGTG TTGATTTACC CGAATCCATC AGCACCAGAT 
CGGTACATTG TTTTGAACAG CGGGCTGACA TATCGTGAAT ACGATTATCT GAATAATGCC 
CGTCAGGTGC CGAAGCTGCC CGATTGGGCG ATCATCGATT GCCGCACACC TCCTGATGCC 
CGCTACCCGG GCAAGATTGT CAAAGCGGGC TTCTTCGATG AACAATGGCG GCTGAAGTCC 
GAGAAGTAA 

 

Protein sequence

MKKFPADSVL VPSARLLCVA LVLSSLAWAD GPGDNQVQSV RPVPPPGISI DPAIRAELEA 
GLKQLEEKFK LLKEKAGKDS FTARYLPDVE IFPRAIRLAL EEGTFYDAKE FQQAKDVLAE 
GMTRAEELAA GKASWATRTG LVVRGFRSRL DGTVQPYGVV VPASYNADNL HRCDLWFRGR 
AEKTPELQFI YQRSRQAGEY TPARTIVVHP FARFCNANKL AGEVDSLEAL EHAQSHYAVD 
PDRISIRGFS MGGAAVWHLA VHYPDRWFAA NPGAGFSETP LFLNVFQQEK LAPSEFEQTL 
WKLYDAPYWA LNLKNLPTIA YSGEIDKQKQ AADVMEAAMA KLGDRLVHII GPQTAHKLHP 
DSKVEIEKRM ASLAVAGRNR VPERVHFTTC TLKYDRSFWV RVTGLEEHWT FGTVDATLIS 
PGGIRIRSER VTDLELNFEA GAFPLINQSI VVEFDGKKPQ SLSVPGRMSD GSWMAQFHQV 
NGLWKAGPRP VEGLRKSHNL QGPIDDALMD SFVFVLPSGK SSSPVVEAWV QSEAARAQKE 
WQRQMRGEVR VLKADQVTPE VMKNSHLILW GDEQSNPLIG QLASQLPIRK TGTNWTVGNS 
KFSDTDHLPV LIYPNPSAPD RYIVLNSGLT YREYDYLNNA RQVPKLPDWA IIDCRTPPDA 
RYPGKIVKAG FFDEQWRLKS EK