Gene Plim_0880 details

Gene Information

• Locus tag: Plim_0880
• ID: 9137565
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1126305
• End bp: 1127060
• Gene Length: 756 bp
• Protein Length: 251 aa
• Translation table: 11
• GC content: 61%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003628923
• Protein GI: 296121145

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGGCAA CTGATCCCGT CGTTATTCTG GGTGCAACCG GTGGAATTGG TACGGCTCTT 
GCGCGTCGCC TGCACAACGC GGGAACGCCG CTCTATCTGA CCGGCCGGGA TCCTGAAAAG 
CTTCAGGTCT TGATGAATGA GCTGGGTGCT CCCGGTCAGG TGGTCGATGT CCTGCAGTCG 
GGTGAAATCG AAGCGGCCTG CCAGAATGCA GCCTCGACGA CAGGCACCCT CTCCGGCATT 
GCGAATTGCG TCGGTTCGCT CATTCTCAAG CCCGCCCATC TCACGACTGA TCAGGAACTG 
ATGAATACGC TCATGCTGCA CATCGGGGGC AGTCTGGCGG TTGTGCGGGC CGCTGCGAAG 
CTCATGCGAG GTGCCGGTGG TTCGATTGTG CTGGTCTCTT CGGCCGCTGC CCGGATCGGG 
CTGGCGAATC ATGAGGCGAT TGCCGCCGCT AAGGGAGGCA TTCAAGGCCT GGCCCTTTCG 
GCAGCCGCGA CTTATGCCAG TAAAAATATC CGCGTGAACG TCGTGGCCCC GGGACTTGTG 
CGAACAGCAC TTACGCAGAA GATCTGGCAA AGCTCAGCGT CAGAAGCCAT GTCGGCCCAG 
ATGCATGCAT TAGGCCGGAT TGGTGAACCC GACGATGTCG CCAGCCTGAT GCAATGGCTG 
CTCGATCCTG CCCAGACCTG GGTGACAGGC CAGATCTTCG GCATCGACGG CGGCCTGGGC 
GTCATCGCTC CCCGCCCCAA ACAAAGCGCC GGTTGA 

 

Protein sequence

MSATDPVVIL GATGGIGTAL ARRLHNAGTP LYLTGRDPEK LQVLMNELGA PGQVVDVLQS 
GEIEAACQNA ASTTGTLSGI ANCVGSLILK PAHLTTDQEL MNTLMLHIGG SLAVVRAAAK 
LMRGAGGSIV LVSSAAARIG LANHEAIAAA KGGIQGLALS AAATYASKNI RVNVVAPGLV 
RTALTQKIWQ SSASEAMSAQ MHALGRIGEP DDVASLMQWL LDPAQTWVTG QIFGIDGGLG 
VIAPRPKQSA G