Gene Plim_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0873 
Symbol 
ID9137558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp1121179 
End bp1121862 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content54% 
IMG OID 
ProductHaloacid dehalogenase domain protein hydrolase 
Protein accessionYP_003628916 
Protein GI296121138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACTC GACGCGGGAC TGTGCTGTTC GATATTGATG GGACACTCAT CGATGCTGGT 
GGAGCCGGAC AGGCTGCCAT GGAAGATGTC TTCCGTGAAG AATTTCGCAC GCTGAAAGAA 
GTGACAGGAA TTCCCACAGC TGGGCGAACG GATCGTGCCA TCACGCGTGA TCTCTTTGCG 
TTTCATGGTG GTGAGTGTGA TCCACTGAGC CTAATGAAAC TGCGCGATCG ATATCTGGCC 
CATCTGCCAA AATATCTCGA AACACATGCT GGGGGGCTCT TACCGGGAAC GGTGGAAATT 
CTCAGCCAGC TTTCGCATTC GGGGGAATGG CGGTTGTCGT TGCTGACAGG CAACTTCGAA 
GAAGCTGCCT GGATCAAACT GCGTCATTAT GGGATCGACC ACCATTTTTC CGATGGCGGT 
TTCGGTGATG AACATGTCGA TCGCGATGAT GTCGCGCGAT CCATCTGGAG TCGCCTCACA 
GGTGATGAAC CTCAATTGGA ACGTTTGCCG GTGATCGTCG TGGGAGACAC TCCTGCCGAT 
GTGAAATGTG GTCGCGCAAT TGGTGCCCGA GTTGTGGCTG TAGCGACCGG CGTTTATGGG 
CGTCATTCGC TGGAAGCTGC AAAACCCGAT TGGTTGATCG ACAATCTGCA CGACACCCGC 
TGGCTGCAGG AATTGCTGGC ATGA
 
Protein sequence
MPTRRGTVLF DIDGTLIDAG GAGQAAMEDV FREEFRTLKE VTGIPTAGRT DRAITRDLFA 
FHGGECDPLS LMKLRDRYLA HLPKYLETHA GGLLPGTVEI LSQLSHSGEW RLSLLTGNFE 
EAAWIKLRHY GIDHHFSDGG FGDEHVDRDD VARSIWSRLT GDEPQLERLP VIVVGDTPAD 
VKCGRAIGAR VVAVATGVYG RHSLEAAKPD WLIDNLHDTR WLQELLA