| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0854 |
|---|
| Symbol | |
|---|
| ID | 9137539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 1099461 |
|---|
| End bp | 1100318 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | AAA ATPase |
|---|
| Protein accession | YP_003628897 |
|---|
| Protein GI | 296121119 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.239928 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGAAT CTCATTGGGG ATTAACCCGG CCGCCATTTG GTGGAGAACT TCCCACGTCT
GGATTTCTCG GGAGTCGCTC ACATCAAGCC GCACTGCTGA AGCTTCGTTA TCTGATCGAG
ACGTCGAAAG GGGCGGGCCT GCTGGCCGGC CAGCCAGGAT TAGGAAAAAC AACCGTTCTG
GAAATGCTCT CTCGTGAGTT ACAGGCTGAT GAAAACTCAA AGAACTCAGA GAGTGGTACA
GCCAGATACC GCTTTGTCCC CGTGCTTTTC CCACAACTGA CACCCTCCGA ACTTCTGGGA
TATATTGCCT CCAAACTCGT CCATGCATCT ACCGGAGACC ATCGTCCCGG CACTGCAGAT
TCCAGCCTGC AAGTGATCGA GCAGCACCTG ACATCTCTGA CAGCCGCAGG CACCAAAACG
ATTCTTCTCT TTGATGACGC CCAGTTGATC GAAGACCGGC GAGTCTTTGG AGTGATTCAG
TCGCTGATGA ATTTTTCTCA GCCGGGGAAG ATGGAACTCG TCACAATTTT TGCCGGCCAG
CTCGAACTGG TCAGCGCGAT CAAACGGATG AGACCACTGG ACGAGCGGAT GGCCTTCAAA
TGCCTGCTCT TACCACTCTC GCTGGAAGAA ACGACCCAGT ACGTCACCGG ACGGATGGCT
GCCGCCGGGT GTCGCGCGAA CGTGTTCTCT ACCGATGCCC TGCAGGCCAT TCATCTCCTC
TCGGCAGGAG TTCCTCGCAG AATCAACCGC TTGTGTGATT TCGCACTGCT GGTCGGTTAC
TCAGAAAACC TCGCCCGCCT GACGGCCGAA CACATCCATG CTGTCGCGGA AGAGATGCTC
TCTGCCATGG CGGCATAA
|
|---|
| Protein sequence | MYESHWGLTR PPFGGELPTS GFLGSRSHQA ALLKLRYLIE TSKGAGLLAG QPGLGKTTVL
EMLSRELQAD ENSKNSESGT ARYRFVPVLF PQLTPSELLG YIASKLVHAS TGDHRPGTAD
SSLQVIEQHL TSLTAAGTKT ILLFDDAQLI EDRRVFGVIQ SLMNFSQPGK MELVTIFAGQ
LELVSAIKRM RPLDERMAFK CLLLPLSLEE TTQYVTGRMA AAGCRANVFS TDALQAIHLL
SAGVPRRINR LCDFALLVGY SENLARLTAE HIHAVAEEML SAMAA
|
|---|
| |