| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0853 |
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| Symbol | |
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| ID | 9137538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 1097933 |
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| End bp | 1099357 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | fumarate lyase |
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| Protein accession | YP_003628896 |
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| Protein GI | 296121118 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.104747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAAA CTCGCATCGA AACAGATTCC ATGGGTGAAG TTCATGTCCC TGCCAAAGCC
TACTACAGTG CTCAGACTCA GCGGGCGATT GAGAACTTCC CTGTTTCTGG CTGGACGTTG
CACCCGGAAC TGATTCGAGC CATGGGCTGG GTCAAGTATG CCTGTGGCGT GGCCAATCGA
GATCTTGGCA AGCTCACTCA CTCGGGAAAG AACAAGCTGA CCGACCAGCA AGTGCAGTTC
ATGCTCGATG CGGCACTGGA AGTGGCCCAT GGGAAATGGG ATGGCGAGTT CCCGATTGAT
GTCTTCCAGA CAGGTTCTGG AACTTCGAGT AATATGAACG TCAATGAGGT CATTTCCAAC
CGCGCCATTG AGCTGGCTGG TGGCGATCGA TTTGAGGCGA AAAAGCCAAT TCACCCCAAT
GATCACGTCA ATATGGGGCA GTCGACGAAT TGCACCTTCC CGACGGCCAT CCATGTGGCT
GTGGCTCATT CGATCAAAAC TCAACTGATT CCTGCGCTGA AGAATCTGGC GAATACGCTC
GCTGAGAAGG CCAAGGCCTG GGATAAAGTT CTGAAAATTG GCCGCACACA TCTGGCGGAT
GCGACACCGA TTCGGCTGGG TCAGGAATTC AGTGGTTTTG CCCGCCAGCT TGAGCTTTCC
GTTCAGAGGG CTCAGCAGGC TATGGCAGCC GTGATGGAAC TTCCGGTGGG TGGTACTGCT
GTCGGAACGG GAATCAACAC ACACCCTGAG TTCAGCAGTC GAGTCTGTGC CGTTTTGGCC
AAAGAGCTGG GTATTCCCTT TATCGAAGCT GTGAACCATT TTGAGGCCAA TGCCCAGCGC
GATGGTTTGG TTGAGTGTCA TGGCCATTTG CGGGCGATTG CCGTCACGCT CTTCAATGTC
GCCAACAATA TTCGCTGGCT CGGTTCGGGC CCACGGTGCG GTTTTTATGA AGTGATCCTG
GCTGATCTTC AGCCGGGAAG CTCGATCATG CCCGGGAAGG TGAACCCGGT CATGTGTGAG
AGCCTGATGC AGGTGGCGGC CCTGGTGATG GGAAATGACC AGACGGTGGC AATCAGTGGT
GCCACAGGTG GAAACTTCCA ATTGAATATT ATGATGCCGG TGATGGGGCA GACGACGGTC
GGGAGTGTGG TGGTGATGGC TGGCGGTGTC AAAGCCTTTG ATGATCTCTG CGCCAAACTG
ATGGAGGCCA ATCCTGAAGC TTGCGAAGCC TCCATCGAAA AAAGTCTCGC CATGGTCACC
AGCCTTAATC CATACATTGG CTACGAGAAG GCGGCACAAC TGGCGAAAGA AGCCTTTAAA
ACCGGAAAAA CCATTCGGCA ATTGTGCCTC GAACAGAAGA TTCTTTCCGA GGAACAACTC
ACTGAGGCTC TCGACCCTTA CAGCATGACT GAGCCTCATG CCTGA
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| Protein sequence | MTETRIETDS MGEVHVPAKA YYSAQTQRAI ENFPVSGWTL HPELIRAMGW VKYACGVANR
DLGKLTHSGK NKLTDQQVQF MLDAALEVAH GKWDGEFPID VFQTGSGTSS NMNVNEVISN
RAIELAGGDR FEAKKPIHPN DHVNMGQSTN CTFPTAIHVA VAHSIKTQLI PALKNLANTL
AEKAKAWDKV LKIGRTHLAD ATPIRLGQEF SGFARQLELS VQRAQQAMAA VMELPVGGTA
VGTGINTHPE FSSRVCAVLA KELGIPFIEA VNHFEANAQR DGLVECHGHL RAIAVTLFNV
ANNIRWLGSG PRCGFYEVIL ADLQPGSSIM PGKVNPVMCE SLMQVAALVM GNDQTVAISG
ATGGNFQLNI MMPVMGQTTV GSVVVMAGGV KAFDDLCAKL MEANPEACEA SIEKSLAMVT
SLNPYIGYEK AAQLAKEAFK TGKTIRQLCL EQKILSEEQL TEALDPYSMT EPHA
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