Gene Plim_0824 details

Gene Information

• Locus tag: Plim_0824
• ID: 9137508
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1060220
• End bp: 1062190
• Gene Length: 1971 bp
• Protein Length: 656 aa
• Translation table: 11
• GC content: 54%
• Product: hypothetical protein
• Protein accession: YP_003628868
• Protein GI: 296121090

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTGGC CTGGCTTTGC ATCACTTTCA GCGGCCTGGT ATCTGCTGCT CCTGGCACCG 
CTGATCCTGT TTTATTTTCT CAAGCTGCGC CGACCGAGAG TCGAGATCCC TTCGTTGGCC 
TTATGGCAGC AGGTGGTTCG CGATTCTCGC GTCAACTCTC CGTTTCAAAG GTTCCAAAGA 
AACCTTTTGC TGCTGGCACA GATTCTGTTG CTGTTGGCTT TGATACTGGC AGCCATGCAG 
CCCTTCTGGC CGGCTCGTTC GCAAACCGCA CGGTATCTGC CTGTGATTAT TGATATCTCG 
GCCAGCATGG AAGGTGTGGA GAAAGCGGGT GGCCAGACCA GACTGCAACT GGCGAAACAG 
GAAGTGACCA AACTGATCGA TGGTCTTATG GCCGATCAGA AAATCAGCCT GATTGCCGCC 
TCTGACTCGG CCCGTCGATT GACGGATTTC ACGAATGATC AACGCATCCT CAAAGCAGCA 
CTTGATCAAC TGACGATTTC TGAATCGACA AGTCAGTTGG AAGATGCCTT CCGCATGTCG 
ATCGCTTTGG CACGCACTGT GCCTGTCGAG ACGGTTGTCC TTTTCAGTGA TGGAAATGTC 
CCTCCAGAAT TCGATCTGGA GCTTCCTTTT CGAGTGAGCT TTCAGAAAGT CCCAGCGGCA 
ACGTCGAATG TGGGGATCAC CGAATTCAAT GCCAGAAAAT CACGCGAGAA CTGGGAGGTC 
TTTGCCCGGG TCGAGGCTTC GTCAAAATTT GCCGGGCTCA CTCAAGTTGA ATTCTTCGAG 
AATGGAGAAC TCCTGAGCAG TGAGTCGATT TCATTGGCTG GCGGATCCGC AGAGCGACTG 
ATTTTTCGCA CTTCTTCGCC AGAAAGTACG GAGGTGGCTC TGCGCCTTGT TCCGGATGGT 
GTGGATGCGG TTGGCAGTGA TAATGAAGCT TTTCTCGTGA CTCCGCAGGT CAGGCCACTG 
AGTATCTATT GCCCTCCCGA ACTGACGACG TTTCGTCATG CCCTGGCTGC CATGAAAGAC 
GTGGTTGTCT TTCCCGCTGA AGGGGCTGCG ACACCATCCT CAGTGGATCT TGTGATTTCT 
AATCAAGTGG CTGATGCCGA ACGTGATGCG CGGGTCATTT TGACCGTGGG TTTGGTTCCC 
GCCGAGCTGG AATCATTTAT TTCGACGGAA GAAGTGGCCA CAGGTTCGGG ATTGGCAGAG 
GTCACGGACT GGTTAAGGAC AGATCCTCTC CTGAGGCATG TGCAGCTTTT AGATGTGCAG 
ATTGGCGGGG CACCGCAATT GAAGGAAGGT GAGTCCGACC GCACCATTGA AGCGGCAGGT 
TTTCAGGTGG TAGCGACATC CACAGGAGGC CCGCTGGTTG TGTCGAGGCC CTCGGGGGCA 
CAGCAGCGCT ATCATATTTT GTTTCCGATG GAACGTTCGA CGCTGCCCTT CCGTGTCGGG 
TTTCCCATCC TCGTGGCCAA TGCCGTTGAT CTGGCTCAGA ATCTGGCAGG CTTGAATGAA 
ACCAAAGCAC TCCGGACGGG TGTCTTCCCC CCGTTGACAC TTCAGCCGGA GACCCGCTAT 
CGCATTGTGG GGCCGGTCGA ACCGGAGTGG AAACTGGCTG CAGGGAGTTC GTTACGATTA 
AGCCCGATGG CTGCCAATGG TCGCCAGCGC ACCACAGCGC GAACCACAGA ATTGACGACA 
GATGCCAACG GACAACTGGC AGGTGTGGCA GCACCGGCTG TGGGTGTCTA CCAGATTTTT 
GATGGTGGAA CTCTCGTCAA GCAGATCGGC GTAGCGCTTC AGAGTGTGCA GGAGACATCT 
CTGTTCGTGC AGCAGGACTT AAGATTTTCA GAAGCCAAAG TTTCCGCAGC CGATGAGAAA 
CTGGCTGTCG AAACACCACT CTGGCGCTGG TTTGCCTGGG CAGCGCTGCT TTTTCTGCTC 
TGGGAATGGT GGCTGTTCCA GAAACCAGCA CTGCCTCTCA AACGTGCTTA G 

 

Protein sequence

MSWPGFASLS AAWYLLLLAP LILFYFLKLR RPRVEIPSLA LWQQVVRDSR VNSPFQRFQR 
NLLLLAQILL LLALILAAMQ PFWPARSQTA RYLPVIIDIS ASMEGVEKAG GQTRLQLAKQ 
EVTKLIDGLM ADQKISLIAA SDSARRLTDF TNDQRILKAA LDQLTISEST SQLEDAFRMS 
IALARTVPVE TVVLFSDGNV PPEFDLELPF RVSFQKVPAA TSNVGITEFN ARKSRENWEV 
FARVEASSKF AGLTQVEFFE NGELLSSESI SLAGGSAERL IFRTSSPEST EVALRLVPDG 
VDAVGSDNEA FLVTPQVRPL SIYCPPELTT FRHALAAMKD VVVFPAEGAA TPSSVDLVIS 
NQVADAERDA RVILTVGLVP AELESFISTE EVATGSGLAE VTDWLRTDPL LRHVQLLDVQ 
IGGAPQLKEG ESDRTIEAAG FQVVATSTGG PLVVSRPSGA QQRYHILFPM ERSTLPFRVG 
FPILVANAVD LAQNLAGLNE TKALRTGVFP PLTLQPETRY RIVGPVEPEW KLAAGSSLRL 
SPMAANGRQR TTARTTELTT DANGQLAGVA APAVGVYQIF DGGTLVKQIG VALQSVQETS 
LFVQQDLRFS EAKVSAADEK LAVETPLWRW FAWAALLFLL WEWWLFQKPA LPLKRA