Gene Plim_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0823 
Symbol 
ID9137507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1059327 
End bp1060223 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF58 
Protein accessionYP_003628867 
Protein GI296121089 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACG CCAGACAATT GACTTCACTG GTCTCGAACA GCGCACTTTC TCGAGCGGAG 
AATCTGCGAC TGGCTCCACG ATTCCGCAAA ACCAACCGCA TGCGGGGTGA ACATCTGGCT
GGTCGCGGTG GTTCAAGTAC CGAGTTTGAA GACTTTCGAG ATTACAGCCC TGGTGATGAC
ATCCGGTATG TCGACTGGAA TATCTTTGCC CGTCTGCATC GCCCTTATCT GAAACTGTAC
CGACACGAAG AAGAAATGCA TGTTGTCATC CTGCTGGATG CTTCCAGTTC GATGAAGTTT
GGCGAAAAGT TTGATCGAGC CCGGCAGGCT GCCGCACTTC TGGCCATGAT GGGGCTCATG
AATATGGAGC CAGTCTCGAT CTACGCCTTG GGCAGCCGGA ATGAGGCCAC GCATCAGATT
CGACGACTGC GCGGGAAAAG TTCTTTCCGC AAACTTTTTG AGTTTCTCGA AAACCTGCCA
GTTGGGGGTG ATGCCGAGAT TGACTTTACC ATCGACGCTG CACTCCGGCA GCACTCGGGT
CGCGGGGTGG TCATCTGCCT GTCAGACTTC CTGACGTTTG GCCGAATTGA TCAGGCCATC
AGCCGGTTGT TTGGAGCTGG TCTGGAACCC TGGGCCATTC AGATTTTATC CAGCGACGAG
CATAACCCTG AGTTAGAACA GGATGTTCGT TTTGTCGACT CCGAAACGGG AGAAACGCTG
GATGTGACAG CCGGGGGAGA TCTGTTGCGA ATTTACGAGG AATACCGGTT GTCACTCGAA
CGAGAACTGG AGCAGGTCTG TCGGCAACGT GGCGGGCGGT CGTTGTCATT CAACACCAGC
CAAAGCGTGG ACAACATCGT CTTCGATACA CTCCTTCGTA AAGGCTGGGT GCGATGA
 
Protein sequence
MANARQLTSL VSNSALSRAE NLRLAPRFRK TNRMRGEHLA GRGGSSTEFE DFRDYSPGDD 
IRYVDWNIFA RLHRPYLKLY RHEEEMHVVI LLDASSSMKF GEKFDRARQA AALLAMMGLM
NMEPVSIYAL GSRNEATHQI RRLRGKSSFR KLFEFLENLP VGGDAEIDFT IDAALRQHSG
RGVVICLSDF LTFGRIDQAI SRLFGAGLEP WAIQILSSDE HNPELEQDVR FVDSETGETL
DVTAGGDLLR IYEEYRLSLE RELEQVCRQR GGRSLSFNTS QSVDNIVFDT LLRKGWVR