Gene Plim_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0796 
Symbol 
ID9137480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp1034143 
End bp1034694 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content54% 
IMG OID 
Productpeptidase A24A prepilin type IV 
Protein accessionYP_003628840 
Protein GI296121062 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTGGC AGAGTTTTCT CATGCAGCAT TGGGATGTCA AATTTGTTTC TCTGGTGCTC 
ATTCTTGCTG CCTGGATCGA CGGTAAAGAA TTGCGAGTTC CTAACTGGAT TACTTTCCCC 
ATGGTGCTCA GCGGCCTGAT TTATGGCTTC GTCATGGGCG GCTGGGCCGG TCTGGGTGAT 
TCACTGATTG GTATGGTTGT CGGCCTGGCC TGCCTGCTGC CACTTTACGC AGTGGGTGGT 
ATGGGTGCTG GTGACGTGAA GCTCATGGCG GGCATGGGAG CCTGGCTGGG TGCAGCCATT 
ACGTGGCAAG CCTTTATGGT CTCTGTCGTT GTCGGTGCGA TTATGGCCAT CATCATGGCC 
TGCTATCGCA AAGATCTGCA TAAGCACGTC GGTCAGGCCA TGTTGATCTG GACCGAATGG 
ACGACCATTC GCGATCCACG CAAGCTGTCA GAAATTGCAG CCGAACGTAA GCCCCGGATG 
CTGCTGTTGC CCTACGGAAT TCCCATCTGC ATTGGATCGA TTGCTTACTT TGTCTATGCC 
GGTCTGATCT AA
 
Protein sequence
MDWQSFLMQH WDVKFVSLVL ILAAWIDGKE LRVPNWITFP MVLSGLIYGF VMGGWAGLGD 
SLIGMVVGLA CLLPLYAVGG MGAGDVKLMA GMGAWLGAAI TWQAFMVSVV VGAIMAIIMA 
CYRKDLHKHV GQAMLIWTEW TTIRDPRKLS EIAAERKPRM LLLPYGIPIC IGSIAYFVYA 
GLI