| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0747 |
|---|
| Symbol | |
|---|
| ID | 9137430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 971004 |
|---|
| End bp | 971462 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | ferric-uptake regulator |
|---|
| Protein accession | YP_003628792 |
|---|
| Protein GI | 296121014 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAGG AAGCGGAAAC CGATGCCGGT TCGGTGGCTG AAATTCGCCG TGTTTTGGGT
AAGGCCAATC TACGCACCAC AGCGGCTCGT ATTGCTGTCC TTCGCCAATT GCAGCAGGCG
ACTGCTCCCG TAACTCATGC CGAGGTCGCT GAAGAACTCG TACCGACGGG TTTCGACAAA
GCGACAGTTT TCCGCAATCT GACCGATCTG GTGGATGCCG GGCTCGTCAC TCGCAGTGAA
CTGGGCGACC ATGTCTGGCG ATTTGAGCTG AATGATCTCA ATAATCCCGA GAAAGATCAG
CATCCGCACT TTGTCTGCAT TACTTGTGGA AAAGTGACCT GCCTCCATGG CAGCGAACTT
CCCAAGTTCG ACAAAGAGAG CTGGGCCCGT ATTGGCAAAG TCAATGAGAT TCTGCTCAAA
GGCTTCTGCG TCCAATGCTC CAACAGCACC AAAAGCTGA
|
|---|
| Protein sequence | MSKEAETDAG SVAEIRRVLG KANLRTTAAR IAVLRQLQQA TAPVTHAEVA EELVPTGFDK
ATVFRNLTDL VDAGLVTRSE LGDHVWRFEL NDLNNPEKDQ HPHFVCITCG KVTCLHGSEL
PKFDKESWAR IGKVNEILLK GFCVQCSNST KS
|
|---|
| |