Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0740 |
Symbol | |
ID | 9137423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 962000 |
End bp | 963847 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003628785 |
Protein GI | 296121007 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCAT CTGCTCCGCA AGCGATCATC GGGGATCTTC AAGGACTGAC GCAGGTTGTG CGTAAGGAGG AATCCGAGGC ACAGACCAGG CCTCTGGATT TCCGGCTGAT TTCCCGAATT CTGACTTATA TGCGGCCCTA TGCAGCCAAA CGGAATGCAC TTCTGGTGGC GGTAGTGCTC CGAGCGATTC AGCTACCGGC ATTGACCTGG GCGATTGCAC TGACCATCAA TGGCCCTGTC ACATCACGAG ATATTCCAGG GGTCTGGCTG GCTGCGGGGG GATTTTTCCT TCTGGCACTT TCGACACAGT TCGTGATGCA TTTTCGACAG CGTTACGCCC TCGAACTGGG TGAACTTGTC GTTAAAGATC TCCGCAATGA GTTGTTTGCA CATCTGCAGA ACATGCCCTT GAGTTTCTTT AACCGTACAA AAGTCGGGCG AATTATCAGC CGCATGATTT CGGATATGGA AGATGTGCGT GTCGGTGTGC AGGAAGTGTT GTTTGTCAGC CTGGTGGCGT TTGGACAGTT GCTCGTCGCG GCAGCCTGCA TGCTCTATTA CGACGTGGGA CTGTTTCTTC TGGTGCTGGG GATGGCCCCG ATTCTGTGGT TGACCAATCG GTACTTCCAC AAGCTGATGA GTGAACTATT GCGGCAACTG CGGGAATCTT TCAGCCGGGT GACAGCCACT TTGGCGGAAT CTGTCCTGGG CGTGCGAGTT ACGCAAGGGT TCAGTCGGCA GGATGAAAAT GCGAGATTGT TCAAGTTACT GGTGCAGGAT CATTCGAAAT ACAACACGCG TGTGATGCAG GCCCAGGGGC TCTTTTTGCC ACTGCTGGAA TTCAACAGCC AGTTCTTTGC GGTGCTGCTT TTAATTGTCG GGAGTTACCG CGTTTTACAA CCCGATTCGA CACTGACCAT TGGCGAACTG GTCGGTTTTT TCTTTATGGC GAACATGTTC TTCTCGCCGA TTCAGATTCT TGGCAATCAG TACAATCAGG CACTGACAGC GATGGCCGGG GCTGAGCGAT TGTTTGCACT GCTGGATACG CCGCCGGAAT GGACAGATTT GCCAAATGCC CGGCCCTTGC CCGATGTGCG AGGACAAGTC GAGTTCGACA ATGTGTGGTT CAGTTATGAA CCTGGCCGGC CTGTTTTGAA GGGGATCAAC TTCAAAGCCG AACCGGGTGA AACGATTGCT CTGGTGGGAC ATACCGGAAG TGGCAAGACA TCGATCATCA ATCTTGTGGC TCGCTTCTGG CTCCCTGACT CTGGCCAGAT CCGCGTGGAT GGAGTCGATC TGCGGGGAGT GACGAGTGAA TCTCTCCATA GGCAGATTGG AATTGTCCTG CAAACCAATT TCCTCTTTGC GGGAACGGTG CTGGATAACG TCCGGTTTGC CCGGCCCGAT GCCTCTTTCG AAGAGGTGCA ACGTGTCTGT CGGCAATTGG GTTGCTGGGA GGAATTCAGC GGGTTATCGC AAGGTCTTGA AACGCCGGTG GGAGAACGTG GTGCCCAGCT TTCGCTCGGG CAGCGGCAAA TGGTCTGTTT TGCCCGGGCA TTGCTGGCCA ACCCGCGAAT TCTGATTCTT GATGAAGCGA CGAGCAGCAT CGATATCGTG ACGGAAATTC GTCTGCAACA GGCACTCAAA GTGGTGATGC AGGGCCGCAC CTGTTTTGTG GTGGCCCACC GGCTCAGTAC CATTCGTGAG GCCAGCACCA TTCTGGTTCT CGATCATGGG GAAATCATCG AGCGGGGAAA TCATCACCAG TTGATTGCCA GGCAGGGGCA TTACGCCCGG CTGTACGAAC GATTTTCCCG TGCCGTTACG CTGCCACCAG CGGGCTGA
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Protein sequence | MKSSAPQAII GDLQGLTQVV RKEESEAQTR PLDFRLISRI LTYMRPYAAK RNALLVAVVL RAIQLPALTW AIALTINGPV TSRDIPGVWL AAGGFFLLAL STQFVMHFRQ RYALELGELV VKDLRNELFA HLQNMPLSFF NRTKVGRIIS RMISDMEDVR VGVQEVLFVS LVAFGQLLVA AACMLYYDVG LFLLVLGMAP ILWLTNRYFH KLMSELLRQL RESFSRVTAT LAESVLGVRV TQGFSRQDEN ARLFKLLVQD HSKYNTRVMQ AQGLFLPLLE FNSQFFAVLL LIVGSYRVLQ PDSTLTIGEL VGFFFMANMF FSPIQILGNQ YNQALTAMAG AERLFALLDT PPEWTDLPNA RPLPDVRGQV EFDNVWFSYE PGRPVLKGIN FKAEPGETIA LVGHTGSGKT SIINLVARFW LPDSGQIRVD GVDLRGVTSE SLHRQIGIVL QTNFLFAGTV LDNVRFARPD ASFEEVQRVC RQLGCWEEFS GLSQGLETPV GERGAQLSLG QRQMVCFARA LLANPRILIL DEATSSIDIV TEIRLQQALK VVMQGRTCFV VAHRLSTIRE ASTILVLDHG EIIERGNHHQ LIARQGHYAR LYERFSRAVT LPPAG
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