Gene Plim_0666 details

Gene Information

• Locus tag: Plim_0666
• ID: 9137347
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 864530
• End bp: 868075
• Gene Length: 3546 bp
• Protein Length: 1181 aa
• Translation table: 11
• GC content: 55%
• Product: membrane-bound dehydrogenase domain protein
• Protein accession: YP_003628712
• Protein GI: 296120934

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTCTT CGTGTCATCG AGATCAGTTC CCCAGCCTGC GGCTGCTGCT TCTGGCCATG 
TTCGCTCTCT TGAGTTGGGG TAATGAAGGG TTCGCCCAGC GCGACCTGAA GAACATTCCG 
GTTCCTGATC CGGCTGAAGA ACTCAAATCG CTGGAAGTGG CCGACGGGTT TGAGATCAAT 
CTGTTTGCTG CTGATCCGCT GATCCACAAG CCAATTCAAA TGAACTTCGA TGCTCAGGGA 
AGGTTATGGG TGGCGGCATC GGAGATCTAT CCGCAGATCG AACCTGGCAA AGTGGCCAAC 
GATAAGATTC TCGTACTTGA AGATACGAAC GGTGATGGTC AGGCCGACAA GACAACAGTG 
TTTGCCGACG GGCTGTTGAT TCCCACAGCT GTCATCCCCG GAGATGGCGG CTCCTATGTG 
GCCAACAGTA CCGAACTCGT GCACTTCAAA GATACCAATG GGGATGGCAA AGCTGATGAA 
TCCCGAGTGA TCCTGTCAGG ATTTGGAACA GAAGATACCC ACCATATTCT GCATACCTTC 
CGCTGGGGGT TTGATGGGCT GCTCTATATG AATCAGTCGA TTTATATTCA CAGCCATATT 
GAGACACCCT TTGGAGTGCG GCGGCTGAAT GCGGGTGGGA TCTGGCAGTA TCGTCCTCCG 
ACGGGACAAC TCGAAGTCTT TGCGCGAGGA TGGGTGAATA CCTGGGGACA TCACTTTGAT 
CGATATGGGC AGTCGTTTGC GACAGACGGT GCGGGTGGTG AAGGGATTAA CTTTGTGGTG 
CCTGGGGCTT CGTATCCGAC GGCGGCGAAC AGCCCGCGAA TTCTCCATGG CCTGAATCCC 
GGAAGCCCCA AACATTGTGG ACTGGAAGTG GTGGATGGTC GGCATCTGCC TGATGACTGG 
CAGGGTGACT TGATCACCAA CGATTTTCGC GGCCATCGCG TCTGTCGGTT TAAACTGACA 
CCGGAAGGGA CAGGGTACGT TTCCAAGCCT ATGCCCGATC TCGTTCGCAC CAATCACGTC 
GCTTTCCGAC CAATCGATAT CAAGCAGGGG CCTGACGGGG CCATTTACAT TGCCGACTGG 
TACAATCCGA TCATTCAGCA TGGTGAAGTC GATTTTCGCG ATCCCCGTCG CGATCACACA 
CATGGCCGCA TCTGGCGCGT GACGGCTAAG GGGCGTCCAC TGGTGAAAAC TCCTGCTCTG 
CAAAGTCTAT CGACTGCAGA ACTCGTGGCA TTGCTGACAG CTCCGGAGCA GTTTACCCGC 
CAGCAGGCCA AACTCGTCTT GCGCGAAAGA CCCCAAAGCG AGGTGATCTC TACGCTGGAA 
AAGCACGCAG CCAGTCTGTC GGCCGACGAT CCCCTAAAGA ATGACTGGCT ACTGGAATCG 
TTGTGGGTGA GAGTCGCCCA TGAAGCCCCA GACTTTAAGA CCTGCGAAGT ACTGCTGAAT 
TCCAGCGACT ATCGCCTTCG TGCCGCGACA GTGCGTGTGC TGGGCCATTG GCAGAAGGAT 
TTGAATTCCG AATCGCCAGT GATGGTCAAA TTGCTGCAAC TGGCGAAAGA CCCACATTCG 
CAAGTGAGAA TGGAAGTGGT GCGGACACTT TCCGCCTTAG GAACGGCCGA TGCGGCACGA 
GCCGTATTGA ATGTCGCTGC AGAGCCCATG GATGAGTTTC TGGAGTATGC CGTATGGCTT 
TCGGCCAATG AGCTGGCGCC TGTCTGGCAT GCGGCTGTTC TCCAGGGAAA GTGGTCTCCC 
GGAGATCAAG CGACATCACC CGCTACGTCA AAGAGTTCGA TTGAACCTTG GTTGTATGGC 
ATCAAGGCGA CCAAAGCTGT GCAGCTCATT CCGGTGCTTG TGCAATGGCT GCAGGCTGGA 
AAGATCCCTG AAGCTGAGAT TGCCTCGACG ATGGAGATTA TTGGGAGTCT CGGTGGCCCT 
CCTCAACTAA GCCTCGTTTT AAATGCCGCA ATCGATCAGA CGACTCAGGC CACCCAGCGA 
TCCATACTTT TGGAAGCTCT CGCGGGAGCA AAGAAGTCGC GGGATATTCA GCCTGCTGGA 
AATCTGGAAA AGATCGCTCC TTTCGTTCAG TCAAAAGAGT TGCGTGAGCA GTTTGTGGCC 
GTGGAACTGG CCGGGTTGTG GAAGCAGGCC CAATTAGCGG GCGAAATTCG CCAGTTGGCA 
AGTGATCGAA ATCGGGATGT CAGCCTGCGC GTGGCGGCAG TTCAGACGCT CGCGAAATTG 
GGAGGAGCAG AGAACCAGAC ACTTCTGGAG CAGCTTTCAA AGCCTTCCGA GAAGGTGGCC 
AATGCTCCGG ATGTCAATGA GGCCGATGGA GTGCGGCTGG CAGCGATTCG CGGGCTGATG 
GTCTCAGCCA GCGAAGCGTC GTCTCAGGCA GCGGCTCTCT GGTTGGCCGA AGGGCCAGCA 
CCTGATGTCG TAAGTGAACT GCTGCAGACA TTCCTGCGGG AAAAGGGTGG TGCCGTGCTG 
TTGGCCAAAA GTCTGGTCAC GGTGAAACTC AGCGAAGATA CCGCCAAGCT CGCGTTGCGT 
TCAGTCACAG GCTCGGGCCG GGAAGAACCT CAGCTTCAAG CGGCATTGCG AGAATCTGGC 
CATCTGGGAA GCGGCCCGAA GGTTTGGTCA ACGGAGGAGT TGGAGAGCAT TCTCAAAAAG 
GTCTCGACCG AAGGGAATGC CGCCCGAGGC GAGCAAGTCT TCCGCCGGGC CGAACTGGCT 
TGCATGAAGT GCCACGCGAT TGGTGGTGCC GGAGGAGCTG TGGGGCCCGA TCTGGTGAGT 
ATTGGTGCCA GTGCCCAGCT CGATTATCTG CTCGACTCGA TGGTCACTCC GAATAAGCAG 
GTCAAGGAGA ATTACAACAC TGTGATTCTG GCATTGGCGG ATGGTCGCGT TCAAAGCGGG 
ATTGTCACTC GCAAATCAGC CAGTGAGATC GTGCTGCGGG ATGCCAACGA TGTTGAAGTT 
GTTGTGCCAG TCAAAGAGAT TGAAGAGCAG AGTGCCGGGA CTTCGCTAAT GCCGGCTGGT 
CTGGCGGATG GTTTGACTCA AACGGAACTG GCCGACTTGA TCACCTTCCT TTCACAACTG 
GGAAAGATCG GGCCCTATGC TCCCCCTTCC GGAAAGTATG CGATGCGCTG GGAAGTCCTG 
GTGCCGACAG ATCCGGCCTG GACGAAGCTG TATCGCACTT CGGATACCGA GTTATTGCGA 
CAAGGACAGG GCCTGGAATG GAAGACTGCC TACAGTCAGG TGGATGGAGC CTTGCCACTG 
GCTGACCTGC CCGCCTTCCG TACACGCGAC CGACTGGCAG AAAAGGCCCG GCAGGTGATG 
TTCCTCAAGA CGACCGCCAC AGTGACAACC GCTGGGGAAG TGGTCTTGAG CCTCAATGAT 
TCCGAAGGGG TCGAGATCTG GATTGATGGC GAGTCGATAC CTCAAGGGCA GATTGTTCGC 
AAATCGTTAG GTGCCGGCAA TCATGTCATC CATCTGGCAA TTGATCTGCA GAAAAGAACG 
AACGAAGTGC AGTTAGAACT CGCGGCAGAG AAGGGGGCCC AGGCGAAATG GCAGATTAAG 
CCATAA 

 

Protein sequence

MSSSCHRDQF PSLRLLLLAM FALLSWGNEG FAQRDLKNIP VPDPAEELKS LEVADGFEIN 
LFAADPLIHK PIQMNFDAQG RLWVAASEIY PQIEPGKVAN DKILVLEDTN GDGQADKTTV 
FADGLLIPTA VIPGDGGSYV ANSTELVHFK DTNGDGKADE SRVILSGFGT EDTHHILHTF 
RWGFDGLLYM NQSIYIHSHI ETPFGVRRLN AGGIWQYRPP TGQLEVFARG WVNTWGHHFD 
RYGQSFATDG AGGEGINFVV PGASYPTAAN SPRILHGLNP GSPKHCGLEV VDGRHLPDDW 
QGDLITNDFR GHRVCRFKLT PEGTGYVSKP MPDLVRTNHV AFRPIDIKQG PDGAIYIADW 
YNPIIQHGEV DFRDPRRDHT HGRIWRVTAK GRPLVKTPAL QSLSTAELVA LLTAPEQFTR 
QQAKLVLRER PQSEVISTLE KHAASLSADD PLKNDWLLES LWVRVAHEAP DFKTCEVLLN 
SSDYRLRAAT VRVLGHWQKD LNSESPVMVK LLQLAKDPHS QVRMEVVRTL SALGTADAAR 
AVLNVAAEPM DEFLEYAVWL SANELAPVWH AAVLQGKWSP GDQATSPATS KSSIEPWLYG 
IKATKAVQLI PVLVQWLQAG KIPEAEIAST MEIIGSLGGP PQLSLVLNAA IDQTTQATQR 
SILLEALAGA KKSRDIQPAG NLEKIAPFVQ SKELREQFVA VELAGLWKQA QLAGEIRQLA 
SDRNRDVSLR VAAVQTLAKL GGAENQTLLE QLSKPSEKVA NAPDVNEADG VRLAAIRGLM 
VSASEASSQA AALWLAEGPA PDVVSELLQT FLREKGGAVL LAKSLVTVKL SEDTAKLALR 
SVTGSGREEP QLQAALRESG HLGSGPKVWS TEELESILKK VSTEGNAARG EQVFRRAELA 
CMKCHAIGGA GGAVGPDLVS IGASAQLDYL LDSMVTPNKQ VKENYNTVIL ALADGRVQSG 
IVTRKSASEI VLRDANDVEV VVPVKEIEEQ SAGTSLMPAG LADGLTQTEL ADLITFLSQL 
GKIGPYAPPS GKYAMRWEVL VPTDPAWTKL YRTSDTELLR QGQGLEWKTA YSQVDGALPL 
ADLPAFRTRD RLAEKARQVM FLKTTATVTT AGEVVLSLND SEGVEIWIDG ESIPQGQIVR 
KSLGAGNHVI HLAIDLQKRT NEVQLELAAE KGAQAKWQIK P