Gene Plim_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0648 
Symbol 
ID9137328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp840941 
End bp841645 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content53% 
IMG OID 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_003628694 
Protein GI296120916 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCCGA ATCCTTCTCG ACTTGATGCG GCATTGGGTA GCCAGATCCC TGTGATCGCT 
CCGTCAATGC TCAAAGTCGA TTTTGCAGAT CTCGCGACAG AAGTCAGTCG GTTGGAAGAG 
GCCCATGCAC ATCTGCTGCA CTGGGATGTG ATGGACGGGA ACTTTGTTCC CAATCTGTCG 
TATGGAGCCA TGCTGATTGC CAGTGTCCGC AAGAGAACGT CCTTGTTCTT TGACGCACAC 
CTGATGATTG CTCATCCGGA AAAGTATGTG GATGAGTACT TAGCCGCCGG ATGTGACGCC 
ATCACAGTTC ATATTGAAGC GGCACCAGAG CCTGCCGAGA TTCTCCAGAG AATTCGTGCA 
GGGGGTGCGC ATGCTGGTCT GGCGATTAAC CCGCATACAC CACTTTCGCA CCTCGAGCCA 
TGGCTTGATC AATGCGATCT GGTTCTGGTG ATGAGTGTGC AGCCCGGGTT TGGCGGTCAG 
AAATTTATGC CCGAGGTGCT TGATAAAGTT CGCGCTTTGC GAAGCCGGCT CGCACCACAT 
GTCCGGCTTT CGATTGATGG CGGGATAGGA ACGACGACGA TTGCTGCAGC ATCAGCTGCG 
GGGGCACGCC TGTTTGTTGC AGGAAGTGCA ATTTTTGATG TCAGCGATTA TGCCATTGCC 
ATGAGGCAAC TGGAGCAGTT GGCATCTTCT TCTTTGGAGT GTTGA
 
Protein sequence
MVPNPSRLDA ALGSQIPVIA PSMLKVDFAD LATEVSRLEE AHAHLLHWDV MDGNFVPNLS 
YGAMLIASVR KRTSLFFDAH LMIAHPEKYV DEYLAAGCDA ITVHIEAAPE PAEILQRIRA 
GGAHAGLAIN PHTPLSHLEP WLDQCDLVLV MSVQPGFGGQ KFMPEVLDKV RALRSRLAPH 
VRLSIDGGIG TTTIAAASAA GARLFVAGSA IFDVSDYAIA MRQLEQLASS SLEC