Gene Plim_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0623 
Symbol 
ID9137303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp807838 
End bp809091 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content53% 
IMG OID 
Productbeta-lactamase domain protein 
Protein accessionYP_003628669 
Protein GI296120891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATGTG CACAGACTGA GAAAACAGGT GCAATCTTAC GTCTGCACAC TTATCATCCC 
CTCATTATAT CATCAAGTGA TGAATTCTGG CTCGCGCCAG GGCCGTTCGA ACGTGAGCGG
GAAGATCGTC AATTCTTGCG AAAGTCACTG GCTATGAATG GCTTGCGAAT GGTTGAACAA
CGGAGTTTTC GTGTTCTGGC GACAGTGCTG GCGATGGCTG CCTTGTTGTG GCTGCCGAGG
AACAGTGTTT TGGCAGATGA GAAAAATGGT GAACTCGACA TTTATTTCAT TGATGTCGAG
GGGGGAGCTG CCACGCTGCT GGTGACACCC GCGGGGGAAT CGATTCTCCT CGATTCGGGC
TATCCTGATT ACGGCGGCCG GGATTTAAAT CGCATTGTGC GCGTGGTGAA AGAGGTCGCT
GGTCGAACTC GAATCGACAA AGCGATCGTC TCTCACTGGC ATCTGGATCA TTACGGCAAT
CATGCGGCAC TCGTCAGCAA AGTTCCCGTT ACGGCCTTTT ATGACCGGGG AATTCCGGAA
GATCTTGCGG AAGACAAAGG GTTTCCCGAG AGAATCGCCT TGTACCGAGC GGCCTCACAG
AACAAGTCGA CAGCCCTTTC CCCCGGAGAC AAACTGCTAC TGAAAAATGC TAAATCAGGT
CAAGGTGCCC CGCAACTCAC AGCCGAGGTG ATCACATCGA GTGGGAAAAC CATTCCGAAC
GAAGGGCCGG CCAACCCGTT TGTCAGTGAG CACGTCGCGA AACCTGAGGA CACTTCCGAC
AATGCCCGCA GTTTGAGTCT GCTCTTCAAA CTGGGGGATT TCGCCTTTCT GACCTGTGGT
GACCTGACGT GGAACACCGA ACATCGGTTG ATGTCGCCTA ATAACCCGAT TGGTCAGGTC
GATCTCTTTA TGGTGACTCA CCATGGCCTT GATGTCAGTA ACAATCCAGT GCTGGTCAAA
GCGATTGAAC CGGTCGCCAC TGTCACCTGC AACGGCCCCA CCAAAGGGGG CATGCTACCG
GTTCTGAAGA CACTTGAGAC GGTCCCGACT CTCAAGGCTC AGTTTCAGTT GCATCGGAAC
ATCAAGCTGG GAGATGACGT CCAGCCACCG CCGCACCGGA TTGCTAATTC CAGCGATACT
GCTGATTGCA AAGGGCATTA CATCAAGGCG TCGGTCTCTC CCGATGGCAA GCAATTTCGT
ATTCAGGTCG AAGGCCAGCA GCCGGAAATG TTTAAGACCC TCTTGCCCAA ATGA
 
Protein sequence
MECAQTEKTG AILRLHTYHP LIISSSDEFW LAPGPFERER EDRQFLRKSL AMNGLRMVEQ 
RSFRVLATVL AMAALLWLPR NSVLADEKNG ELDIYFIDVE GGAATLLVTP AGESILLDSG
YPDYGGRDLN RIVRVVKEVA GRTRIDKAIV SHWHLDHYGN HAALVSKVPV TAFYDRGIPE
DLAEDKGFPE RIALYRAASQ NKSTALSPGD KLLLKNAKSG QGAPQLTAEV ITSSGKTIPN
EGPANPFVSE HVAKPEDTSD NARSLSLLFK LGDFAFLTCG DLTWNTEHRL MSPNNPIGQV
DLFMVTHHGL DVSNNPVLVK AIEPVATVTC NGPTKGGMLP VLKTLETVPT LKAQFQLHRN
IKLGDDVQPP PHRIANSSDT ADCKGHYIKA SVSPDGKQFR IQVEGQQPEM FKTLLPK