Gene Plim_0564 details

Gene Information

• Locus tag: Plim_0564
• ID: 9137242
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 704086
• End bp: 706101
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 54%
• Product: 4-amino-4-deoxy-L-arabinose transferase-like glycosyltransferase of PMT family
• Protein accession: YP_003628611
• Protein GI: 296120833

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCTTA CTGGTCAATG CTCTTCTGCT GGTGGTCAAA CCAGTCCGAT GCGCCGCTTT 
CCTGATTGGA TGCTGGAATG GCCTCTATAT CTGCTGCTGG CAATCGTCGG GATCGTCTAC 
TTCAGTCGCA TTGAGTATCC CCCGCTGCGT GGTGAAGAAA CCCGCCGCGC GCTGGTGGCG 
ATCAATATGC AGACTTCGGG CGACTGGGTT GTTCCCCGCA TGCAGGGAAC ACCCTATTTT 
ATGAGCAGCC GCCCGCCAGT TCATAACTGG ATGATCGCCG GCAGCATGGC CTTGAGAGGT 
TCCGAAGACA TCACTTCGAT TCGGCTGCCT TGCCTGCTCG CGGTCGCATT GCTTTCAATC 
ATTTTATACG GGTATGCCCG GCAATCGTTA TCGCGTGTCG GTGCTTTCGC GACGGGGCTG 
GCTTATGTCA CCATGATTCA AGTCATGGAA CTGGGCCGCA CGGGAGAGAC AGATCTTCCT 
TTCACGTTGT TTCTCTCATC GGCTCTGCTG TTGTGGCACA CTGGCTGGCA GAAACAATGG 
TCGGCATGGA TCATCTGGCC CGTGGCTTAC TTACTGCTGA CTGGCGCCAT CATGACCAAA 
GGCCCACAGG CTCCTGTCTA CTTCGCCGCG ACTATCGGGC TGTATCTGCT GATCAATGGC 
CGTGCTCGAT TCGCACTCTC CTGGGCCCAC GTATCTGGCA TTGCGCTATG TGCCAGCCTG 
ATTGCGATGT GGCTTGTGCC CTTTTACCTG CAATTAGGAA TGCCTGGTCT TCGCCATGTC 
TTTACCGGTG ATGTGGTTCT TTATGGTGGT GATCGAACGA TCTTTACCTA TTTGAAACAT 
CTGACGGAAT TCCCAATCTC GCTGGTTGTG GGTTGCTGGG CTCCCTGGTC ATTATTGCTG 
GTCAATCTGT GCTCGAAAAC ATGGCGTCAA CGCATGGCAC CTTACCATCA GGTGATGCTG 
TTTGCCGGTC TCGCTCTGGT CACATCGTTT CCGACAGTCT GGCTGATCAC TGGCACCCGC 
ACACGCTTTC TGATGTCTGT GTACCCATTG GCAGCGGTGC TGATCGGTGT GACAATCGAG 
ACGCTCTATC AGTGGGTCAA AGCCTCGAAA GCCGTTGAGC TATCCTTAGC CTCCACGTCA 
TCAAGTCGAC AGGAAAATCT CAGCGACAAT CCTGGGCCGA TTCTGCCGCT CTCCAGGTTT 
ATCGGCACCT TTGCCATCCT GGCCTGGATT GCTGGTGGAG TGATGGCATT GCTGACGGTG 
GCAACGGCGC TTTCGCTCCC TGTAGGAAAT CTGTCAGTCC CACCTGTGTA TGGCGTCTTT 
CTGATGATGG CTGCGGCGCT ATTGGGCAGA ACCATGTGGG TGTGCCGATC GACAGCCACC 
GAAGCGCGAT GTATTCAAGG TCTTGCGGCC CTGGGATTGT TCGTTGGTGG AACATTCGTG 
ACAGCTGTGG TTGACGATTA CACTCGGCGC AGCTCGCGTA TCGATCTGGC AGTCGAGAAG 
TTGCTTAAAG ATCTGCCCGA AGGAGCGGAA CTTGTCAGTT TGGGAGAAGT CCACCACAAT 
TTTGAATACC AGTACTATCG ACGCACTGGT CGCTTTATCC GACGGATCGA TCCAGAGCCT 
GTTCAACCTC AATCCATATC GAACAGCGTT GAATCAGCAG CAGGTGCGGC TTCGATCAAT 
AACAATCAGC GATCTATCAT TTCCCGTTTC TCGCCTGAGC AACTTTCAGG GCTAACCTAT 
CTCTGCACCT CGTACCCCAG GTATCTGGAG AGCGATTACC TGCCAGTCGC CTGTGAGCAA 
GTTTGCGTTG TGGCTTGTGG TCGTTTTCTT GGTAAAGACC CAGATATGGG AGTTGTGGTG 
GCGCGTTTGC CAGTCGAGCA TCAACTCGCC CAGGAATTGC AGAACAGCAC TGGCTTGCCA 
GCGCAGATTC AGAAAAGCTC GCAGCCATCA GGTGCGATCA GCGAACCTGG TACGATTCTG 
CCAGTCTCAG CGACTCAGGA ATCCATCCCC AAGTAG 

 

Protein sequence

MNLTGQCSSA GGQTSPMRRF PDWMLEWPLY LLLAIVGIVY FSRIEYPPLR GEETRRALVA 
INMQTSGDWV VPRMQGTPYF MSSRPPVHNW MIAGSMALRG SEDITSIRLP CLLAVALLSI 
ILYGYARQSL SRVGAFATGL AYVTMIQVME LGRTGETDLP FTLFLSSALL LWHTGWQKQW 
SAWIIWPVAY LLLTGAIMTK GPQAPVYFAA TIGLYLLING RARFALSWAH VSGIALCASL 
IAMWLVPFYL QLGMPGLRHV FTGDVVLYGG DRTIFTYLKH LTEFPISLVV GCWAPWSLLL 
VNLCSKTWRQ RMAPYHQVML FAGLALVTSF PTVWLITGTR TRFLMSVYPL AAVLIGVTIE 
TLYQWVKASK AVELSLASTS SSRQENLSDN PGPILPLSRF IGTFAILAWI AGGVMALLTV 
ATALSLPVGN LSVPPVYGVF LMMAAALLGR TMWVCRSTAT EARCIQGLAA LGLFVGGTFV 
TAVVDDYTRR SSRIDLAVEK LLKDLPEGAE LVSLGEVHHN FEYQYYRRTG RFIRRIDPEP 
VQPQSISNSV ESAAGAASIN NNQRSIISRF SPEQLSGLTY LCTSYPRYLE SDYLPVACEQ 
VCVVACGRFL GKDPDMGVVV ARLPVEHQLA QELQNSTGLP AQIQKSSQPS GAISEPGTIL 
PVSATQESIP K