| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0558 |
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| Symbol | |
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| ID | 9137236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 695399 |
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| End bp | 696940 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003628605 |
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| Protein GI | 296120827 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGCGA CTGCCCAGAT CACCGATCCG AATCCTCCGC CCGCTATGAT TCACCCGGCA
ACTCCCGCAA AGCCGGGATC GTCCCTGACC CGGGGCATCG TGATCGTCAT AACGCTGGCT
GTCGTCTCGC TGGTGGGATA CTGGTTTTGG CGAGAAAAGT TTTCCTCGGG AAAGACGACA
ACTCCTCGGG ATTCTCAATC GCTATTGGTA ACTCAAGAAA CCCGCCTCAG TGAGGGGGAA
AGCACTCACT CTGTGGCTGC ATCTCCAGGA TCAAATCCTC AGGATTCACC TGATCTGGCC
GCGAAGGCAA AACCGGCCGT GATTGTCACG ACCAGCCCTG CCCTGGTCGC CAATGTGCAG
CGGATGCTCA AAGCGGTGGG CACGCTCGAA GGATTTGAAG AAATCAGCCT CAGCCCGCAA
GTTGGTGGGA GAATTCTGGC AATCCACAAA GAAGTGGGTG ATCTCGTCGC ACCGGGTGAT
CTGCTCATGG AGATCGATCC TCAGGATGCC CTGCTGACGG TCAAGGAATG CCAGAGTGCT
TTGGATCTGG AACTCTCGAA ACTGGGTTTG AAGGAACCGC CGGGGCAAAA CTTTAACGTC
GAGGCTGTCC CGGCCGTCCA GAAGGCGATG TTATTGGAAC TGAATTCTCT TCGCACTTTG
GAGCGAGTGC GACAACTCGC CTCTCAAAAA GTCACGACTC AGGATGACCT GGAACGAGCC
GAAACAAATT ACGAAGTGGC CAAGGTCGAG GCTCGCCAGC AACGATTGCT GGCTGGAGAA
ACGATAGCCG CCATTCGCCA GAAAATTGCA CTTCTAAAAA CGGCTGAAAA GCGACTGCAA
GATACGCGGG TGGTGGTCCC GACACTGACC TGCCTCGAAG GTGATGTCAA AGTTCCCTGT
TCGCCACAAT TGACCGTGGC CGAGCGTCAT GCTTCGGAAG GCGAAAATGT TGTCGTGACT
CAGATTTCCC CCGTCTTTCT TCTGGTGATC GAACATCCTT TGAAGCTGAA GGTATCACTT
CCTGAAAGAG TCATGGGACA GGTCAAGACC GGGCAAAAAG TGCGGGTAAC CATTGAAGCC
TACCCTGGTG AGATCTTCAC CGGCGAGGTG AAACGCGTGA ACCCGACCAT TCAGAGAAGC
AGCCGGACGT TTGAAGTTGA AGTGGCGATC CCGAATGAAG ATCGCCGCCT GAAATCTGGA
TCTTTTGCTG TCGCTCAGAT TCTGACGGAT CACCGCCCGA CGGCTGTCGT GGTACCTGAA
TCAGCGATTG TGAGGTTTGC CGGGGTGGTC AAGCTTTTCA AAGTGACGCC GCAAAAAACA
GTGCGGGAAG TTCTCGTGAT TCTTGGCGAA CGCATCGAGC AGCAGGTTGA TGGCAAAAGC
GTTCCTTATG TGGAAGTGAC GGGTGATCTT CAGCCAGGTG AAACCGTCGT GACATCCGGT
CAGTCACAAC TGGTCGATGG AATCGCCATC ACACTGCGTG AGCCTGCACC GAATACGACT
TCTGAGGCAA CTGCTGCTCC AGCGAAAGGA GCCCACCAGT GA
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| Protein sequence | MTATAQITDP NPPPAMIHPA TPAKPGSSLT RGIVIVITLA VVSLVGYWFW REKFSSGKTT
TPRDSQSLLV TQETRLSEGE STHSVAASPG SNPQDSPDLA AKAKPAVIVT TSPALVANVQ
RMLKAVGTLE GFEEISLSPQ VGGRILAIHK EVGDLVAPGD LLMEIDPQDA LLTVKECQSA
LDLELSKLGL KEPPGQNFNV EAVPAVQKAM LLELNSLRTL ERVRQLASQK VTTQDDLERA
ETNYEVAKVE ARQQRLLAGE TIAAIRQKIA LLKTAEKRLQ DTRVVVPTLT CLEGDVKVPC
SPQLTVAERH ASEGENVVVT QISPVFLLVI EHPLKLKVSL PERVMGQVKT GQKVRVTIEA
YPGEIFTGEV KRVNPTIQRS SRTFEVEVAI PNEDRRLKSG SFAVAQILTD HRPTAVVVPE
SAIVRFAGVV KLFKVTPQKT VREVLVILGE RIEQQVDGKS VPYVEVTGDL QPGETVVTSG
QSQLVDGIAI TLREPAPNTT SEATAAPAKG AHQ
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