Gene Plim_0543 details

Gene Information

• Locus tag: Plim_0543
• ID: 9137221
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 680415
• End bp: 681005
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 58%
• Product: putative rRNA methylase
• Protein accession: YP_003628590
• Protein GI: 296120812

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.313767
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGACCAG TGCCGCTAAC CACCCTTGCC CATGAACTGC TCAGGCAGCA TCTGCAGCCG 
GGAGATTTTG CGATTGATGC GACTGCCGGG AATGGCCATG ACATGGAGTT TCTCGCCAGA 
ACGGTCGGCC CGGCAGGGTT GGTATGGGCC TTCGATGTTC AGGAGCAGGC GATCGCTGCC 
AGTGAATACC GGCGGTCTCA AGCGGGGGTG AACTGGGTGC AATTACAACA GGTTTCGCAC 
AGCCAGATGA AAGCCGTGAT CCCCGAAAAG TATCATGGGA AGTTGGCCGC CGTCATGTTG 
AATCTGGGCT ATCTCCCCGG AGGCGATAAG TCCATCACTA CCACGGCGAC GGAGACGATC 
GCGGCACTGG AACAGGCCTT GATGCTGCTT TCTGCGACCG GCCTGCTGAC GGTCATGCTC 
TATCCCGGTC ATCCGGCGGG GGCAGCGGAA ACCCAGGCTG TGAGGGAATG GGCTCAAGGT 
TTACCTGCGT ACTTCGAAGT AAAGACCCAG CAATATGCGG AACGTGGCCC CCTCTCAGCA 
ATACTGATGA CCATTCACAA ACGACCAGAG TCAGCTCTCC ACACTCTATG A 

 

Protein sequence

MRPVPLTTLA HELLRQHLQP GDFAIDATAG NGHDMEFLAR TVGPAGLVWA FDVQEQAIAA 
SEYRRSQAGV NWVQLQQVSH SQMKAVIPEK YHGKLAAVML NLGYLPGGDK SITTTATETI 
AALEQALMLL SATGLLTVML YPGHPAGAAE TQAVREWAQG LPAYFEVKTQ QYAERGPLSA 
ILMTIHKRPE SALHTL