| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0535 |
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| Symbol | |
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| ID | 9137212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 670464 |
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| End bp | 673310 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | cytochrome c biogenesis protein transmembrane region |
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| Protein accession | YP_003628582 |
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| Protein GI | 296120804 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTATG CCGCAACATC CCAGCCTGCC CAGACTGATC ACTGCGATTC AAAGCACGCG
GATTATTCCA ATCACTCGGA AATTGATTGC CTTGATTTCC ATCGACCAAG TGTCGTGAAG
GGCCGCCATA ACACCAGCCA TGGGCTCTGG CAGAGCCTTT GGAAATTGTC TGCCGTGGTT
CTCGCGGTGC TGGTTTTCCC AATCACGGCA CAGGCACAGT TTGATGATCT CTTTGGCGAT
TCGGCAGGTG ATTCGCTATT GGGTGGAGCT GCCGCCAAAC CGGAAGTCTC AGCTCAATTG
ATACTGCTTC CAGAACAGGC GAGCGGACTC CAGGCACAAC ACCTCCAGGC ACAACTCAGT
GTGACCGTCG TGCTGCCGGA AGGGCACTAT ATTTACGATG TGCAAGGCAA GTTTGAGGGC
CGCACCCAGA TTCGTACCAA GCTTCCAGAA GGGGTAACTG CGGCTGGTGC ATTTGTCTCT
GCAAAACCAC CACAGAAGAT CTTTGAACCA CTCTTTGGAG TCGATCTTTT CAAACTTCAC
GATTCAGCGA CATGGACGCA GGTGTTGAAT ATCGCCCCGA CTGTCGATCT CAAAAACCTG
GTCATCAGCG GTGGGCTCGA AGGACAATAC TGCAGCGCCG GTGAAGGTGG GCAATGCCTG
CCAATTATTC CGGCCATCAA ATTCTCGACT AAGCTCGAAG GAAACATCCC GGAGCGCATG
GCGGCTAAGG CGAGCACCAC AACCACAGTC GAACAGCCCG CCCCAGCACA AATGCTTCCT
TTTCGTGTGA CCGAGCGACT TAAGCGTGGC GTGAAGCCTC AGCCAATCGA ATTCACTGCA
CAGCTGACCC CGGAAAATGC CAAACCGGGC GAGAAGGTCG AACTTGTCCT CACCGCGAAG
ATCGATCCCA AATACCACAC TTTCTCAATG ACGCAACCCG ACGGATTTGG AGGCTCGGCC
ACAGTTGTTG ATTTCGAACA ATTGAATGGC CTTTCGGAAG CGGGCCCGTT TGTGGCAGAT
CATCCCCATG AAATCGAGCC GGGAGCCGGT GGGCCACTGG AGGTTTATCA TGATCGCGTC
ACCTGGACGA AACCTTTTGT GGTCAACGCA GGGCAAACCC CCGGAGCGTA TGGCTTGAAA
GCCATTGTGC ATTCACAGGC CTGTACTCAG GGCTCGTGTG TGCCCATGCC CAAGTTCAAA
CTGGCTCTGG GAATGCAGGA ACCATCCCGC GCTGGTGTCG AAGCCTTGCC TCAAGAACGC
GGCTCTCCTG CTGAAACGGG GAATACAAAA GCACCCGTTC CACCCGAGGA ATCCACTCGC
GAATCCACGA CGGGGACAGC AGAAACCAGC GCCAGTCAGG CGGGTGCTTT AAGTGGAGTG
ACCTTCTGGG AAGATGATGG CGATGCTCAG GAAGAGTCAT CCGCAGCGGC AGGGACTTTG
GGTTACCTGT TGACAGCCTT TCTGGCGGGA TGGCTGGCTT TGCTGACCCC TTGTGCATTT
CCGATGGTGC CGATTACCGT CGGATTTTTC CTCAAGCAGG GGCATGGGAA ATCGGTTGGC
TTAGCCGTCG TTTACTGCCT GGCCATTATT GGCACCTTTA CGTTACTTGG CGTTGGCCTT
TCGCTGATCT TTGGAGCCAC ATTCCTGACA CAACTGGCTA ATAATCCCTG GATGAATTTT
GCGATCGGGG CGATCTTTGT CGCTTTTGGT CTGAGCATGC TGGGATTGTT TGAAATTCAG
CCGCCATCGT GGCTGCTCAC ATACACCGCC AATCAGGAAG CTGCCGGTGG GTATCTGGGT
GTAATCTTTA TGGCGTTAAC CTTCACGCTG ACATCGTTTA CCTGCACCTT TCCCGTGGCA
GGGACAATTC TCGTGGCGGC ATCTCAAGGG AACGTGTTCT GGCCGATCCT GGGGATGCTG
GCTTTTTCGA CGGCTTTTGC GATGCCGTTC TTTCTGCTGG CACTCTTCCC GAGCATGCTG
CGCAAGCTTC CTAAGAGCGG CGGCTGGCTC TTTACGTTGA AGGTGGTGTT GGGGTTTGTG
GAAATTGGGG CGGCAATCAA GTTCTTCAGC GTGGCGGATC TGTCGCTGAA TCCACAGCCG
ATGCTCTTTG ATTTTGCCTT TGTGATGGTG GCCTGGAGTG TGCTGGCCAT TACTGCGGGC
TTGTATCTGC TGGGGATATT CCATCTGTCG CATGATCAGC CACAGGATCG AATTTCTCCC
TTGCAGGCGT TGGCCGGGAC AACGTTTCTG GGGCTTTCGC TTTTTCTAAT GGTGGGCGTG
CTGACTCCGG AAAAATCAGG GGGTGCCTTG ATGCCGCAGA TCCTGGCCTT TGCACCGCCT
CAATTAAAGC AAGGCTTCAA AGAGACTGAG GAACTCGGCC CGGTGATGGT GCATGATGGA
ATTCCGTTTG CACTCGATGT GAATCGTGCG CTGTCCTTGG CGAAATCGAA GCAACAGCCG
CTGTTCTTTG ACTTCACCGG TGTGAATTGT GTCAATTGCC GACTGATGGA GCAGAAGATG
AAGCTACCGG ATAATCATTC CCGACTGGAG CGATTTCTGG CGACGCAATT GTTTGCTGAT
CGCGTACCAC ACATCACCGA TGCGGATTAC GCCGAGAGCC TGCGCGATCG CAATATCGAT
CTCCAGGTGA AGTGGTTTGG CGATGTTTCA CTGCCATCGT ATGCGGTGGT TTCGCCGGAT
GGAAAAACCA TTCTGGCGGT CTATAAGGGT CTTGAACGTA AAGAGGGTGA GTTTGCTGCG
TTTCTTGATA AGGGGTGGAA TCGCTTCGAG AAGTGGAAAG CGAAGCAGGT GGCGAGCAAA
GAACCTGCAT CTGTCGAACG GCGATAG
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| Protein sequence | MPYAATSQPA QTDHCDSKHA DYSNHSEIDC LDFHRPSVVK GRHNTSHGLW QSLWKLSAVV
LAVLVFPITA QAQFDDLFGD SAGDSLLGGA AAKPEVSAQL ILLPEQASGL QAQHLQAQLS
VTVVLPEGHY IYDVQGKFEG RTQIRTKLPE GVTAAGAFVS AKPPQKIFEP LFGVDLFKLH
DSATWTQVLN IAPTVDLKNL VISGGLEGQY CSAGEGGQCL PIIPAIKFST KLEGNIPERM
AAKASTTTTV EQPAPAQMLP FRVTERLKRG VKPQPIEFTA QLTPENAKPG EKVELVLTAK
IDPKYHTFSM TQPDGFGGSA TVVDFEQLNG LSEAGPFVAD HPHEIEPGAG GPLEVYHDRV
TWTKPFVVNA GQTPGAYGLK AIVHSQACTQ GSCVPMPKFK LALGMQEPSR AGVEALPQER
GSPAETGNTK APVPPEESTR ESTTGTAETS ASQAGALSGV TFWEDDGDAQ EESSAAAGTL
GYLLTAFLAG WLALLTPCAF PMVPITVGFF LKQGHGKSVG LAVVYCLAII GTFTLLGVGL
SLIFGATFLT QLANNPWMNF AIGAIFVAFG LSMLGLFEIQ PPSWLLTYTA NQEAAGGYLG
VIFMALTFTL TSFTCTFPVA GTILVAASQG NVFWPILGML AFSTAFAMPF FLLALFPSML
RKLPKSGGWL FTLKVVLGFV EIGAAIKFFS VADLSLNPQP MLFDFAFVMV AWSVLAITAG
LYLLGIFHLS HDQPQDRISP LQALAGTTFL GLSLFLMVGV LTPEKSGGAL MPQILAFAPP
QLKQGFKETE ELGPVMVHDG IPFALDVNRA LSLAKSKQQP LFFDFTGVNC VNCRLMEQKM
KLPDNHSRLE RFLATQLFAD RVPHITDADY AESLRDRNID LQVKWFGDVS LPSYAVVSPD
GKTILAVYKG LERKEGEFAA FLDKGWNRFE KWKAKQVASK EPASVERR
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