Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0523 |
Symbol | |
ID | 9137200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 653217 |
End bp | 654536 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | protein of unknown function DUF1501 |
Protein accession | YP_003628570 |
Protein GI | 296120792 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAATTT TCCAGCCTGA CGGTATGAGT CGCCGACACT TTGTGCGGCA CCTGGCAGCG ACAGCTGCAA CAATTCCGGC TCTTGAATTC ATCTCTCATG TGCGGGCCAA CGCAGCAGAG CTGAAGAAGA ACCAGAAGTC TTGCATCCTC ATGTGGATGA GTGGTGGCCC CCCCACCATC GACATCTGGG ATCTCAAGCC TGGCTCCAAG AATGGTGGCG AATTCAAGCC CATTTCGACG AAGGGCGATC TGCAGATCAG TGAGCACATG CCCAAGACGG CTCAGGTGAT GAATCATCTG TCAGTCGTGC GTGCCATGAG CACCCGCGAA GCTGACCATG GTCGCGGCAC TTATTTCATG CACACGGGCT ATGTTCCAAA TCCGACTGTC GTGCATCCAT CCTTCGGCTC GGTGGTGAGC TACGAACTGG GAACCAAGCG GAAAGAGCTG GAAATTCCAG CCTTTGTCTC GATTGGCGGC GGTCGTGAAG GAACAGGCCC AGGCTTCCTG GGGATGTCCA ACGCTCCCTT CGTGGTGGAT TCGAACGGCG GCATTCGCAA TGCTGACTTG AATGGCGTGT CAGCCGGTCA ATTGGGTCGC CGCCTGGATA TGCTGGGTTC TGTTGAAGAA GGTTTCATCA ACTCACAGCG TGGTGAGTCT GGTCAGTCTC ACAAGGAGAT TTACCAGAAG GCTGTGAATC TGATGACTTC GAAGCAGATG GACGCTTTCA AGGTGGCTCA GGAATCGCCT GAAACATTGG CTCGCTACAG TCCAACACCT AATGGTAATG CCATGGGTGG TGGTATGGGT GGGATTAGTG GCTTTGGCCG TGGTCTCCTG ATGGCCCGTC GCCTGGTCGA ATCCGGCGTG CCATTTGTGG AAGTCGATTT CGGCGGCTGG GATCTCCACA ACGATGTCTT CAATTCGCTG AAGAATCGTA TGCTGCCCCA GTTGGATGCC GGGATTTCCG CTCTGGTCAC AGACCTCAAA GAGCGTGGTA TGCTCGATAA TACCGTCATT GTGTGGATGG GTGAATTTGG TCGTACACCT CGAATCAACC AGAACACTGG TCGCGATCAC TGGGCAGCCA GCTGGTCCAC GATGATTGGT GGCGGTGGTC TGCGTGGTGG TGTGGCTGTT GGCGAGACCG ACAGTGACGG CATTGCAGTA GCCAGCGGCA AGAGCTACCT GCCCGGAGAT ATCTGGGCCA CAGCAGCACA TGCTCTGGGG ATTCCTCTGG ATACCGTGCA CACTTCGAAG CGTGGACGCC CGATGAAAAT TGCTAACGGT GGAACACCAA TCAAGGAATT GATTTCCTAG
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Protein sequence | MSIFQPDGMS RRHFVRHLAA TAATIPALEF ISHVRANAAE LKKNQKSCIL MWMSGGPPTI DIWDLKPGSK NGGEFKPIST KGDLQISEHM PKTAQVMNHL SVVRAMSTRE ADHGRGTYFM HTGYVPNPTV VHPSFGSVVS YELGTKRKEL EIPAFVSIGG GREGTGPGFL GMSNAPFVVD SNGGIRNADL NGVSAGQLGR RLDMLGSVEE GFINSQRGES GQSHKEIYQK AVNLMTSKQM DAFKVAQESP ETLARYSPTP NGNAMGGGMG GISGFGRGLL MARRLVESGV PFVEVDFGGW DLHNDVFNSL KNRMLPQLDA GISALVTDLK ERGMLDNTVI VWMGEFGRTP RINQNTGRDH WAASWSTMIG GGGLRGGVAV GETDSDGIAV ASGKSYLPGD IWATAAHALG IPLDTVHTSK RGRPMKIANG GTPIKELIS
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