Gene Plim_0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0523 
Symbol 
ID9137200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp653217 
End bp654536 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF1501 
Protein accessionYP_003628570 
Protein GI296120792 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATTT TCCAGCCTGA CGGTATGAGT CGCCGACACT TTGTGCGGCA CCTGGCAGCG 
ACAGCTGCAA CAATTCCGGC TCTTGAATTC ATCTCTCATG TGCGGGCCAA CGCAGCAGAG
CTGAAGAAGA ACCAGAAGTC TTGCATCCTC ATGTGGATGA GTGGTGGCCC CCCCACCATC
GACATCTGGG ATCTCAAGCC TGGCTCCAAG AATGGTGGCG AATTCAAGCC CATTTCGACG
AAGGGCGATC TGCAGATCAG TGAGCACATG CCCAAGACGG CTCAGGTGAT GAATCATCTG
TCAGTCGTGC GTGCCATGAG CACCCGCGAA GCTGACCATG GTCGCGGCAC TTATTTCATG
CACACGGGCT ATGTTCCAAA TCCGACTGTC GTGCATCCAT CCTTCGGCTC GGTGGTGAGC
TACGAACTGG GAACCAAGCG GAAAGAGCTG GAAATTCCAG CCTTTGTCTC GATTGGCGGC
GGTCGTGAAG GAACAGGCCC AGGCTTCCTG GGGATGTCCA ACGCTCCCTT CGTGGTGGAT
TCGAACGGCG GCATTCGCAA TGCTGACTTG AATGGCGTGT CAGCCGGTCA ATTGGGTCGC
CGCCTGGATA TGCTGGGTTC TGTTGAAGAA GGTTTCATCA ACTCACAGCG TGGTGAGTCT
GGTCAGTCTC ACAAGGAGAT TTACCAGAAG GCTGTGAATC TGATGACTTC GAAGCAGATG
GACGCTTTCA AGGTGGCTCA GGAATCGCCT GAAACATTGG CTCGCTACAG TCCAACACCT
AATGGTAATG CCATGGGTGG TGGTATGGGT GGGATTAGTG GCTTTGGCCG TGGTCTCCTG
ATGGCCCGTC GCCTGGTCGA ATCCGGCGTG CCATTTGTGG AAGTCGATTT CGGCGGCTGG
GATCTCCACA ACGATGTCTT CAATTCGCTG AAGAATCGTA TGCTGCCCCA GTTGGATGCC
GGGATTTCCG CTCTGGTCAC AGACCTCAAA GAGCGTGGTA TGCTCGATAA TACCGTCATT
GTGTGGATGG GTGAATTTGG TCGTACACCT CGAATCAACC AGAACACTGG TCGCGATCAC
TGGGCAGCCA GCTGGTCCAC GATGATTGGT GGCGGTGGTC TGCGTGGTGG TGTGGCTGTT
GGCGAGACCG ACAGTGACGG CATTGCAGTA GCCAGCGGCA AGAGCTACCT GCCCGGAGAT
ATCTGGGCCA CAGCAGCACA TGCTCTGGGG ATTCCTCTGG ATACCGTGCA CACTTCGAAG
CGTGGACGCC CGATGAAAAT TGCTAACGGT GGAACACCAA TCAAGGAATT GATTTCCTAG
 
Protein sequence
MSIFQPDGMS RRHFVRHLAA TAATIPALEF ISHVRANAAE LKKNQKSCIL MWMSGGPPTI 
DIWDLKPGSK NGGEFKPIST KGDLQISEHM PKTAQVMNHL SVVRAMSTRE ADHGRGTYFM
HTGYVPNPTV VHPSFGSVVS YELGTKRKEL EIPAFVSIGG GREGTGPGFL GMSNAPFVVD
SNGGIRNADL NGVSAGQLGR RLDMLGSVEE GFINSQRGES GQSHKEIYQK AVNLMTSKQM
DAFKVAQESP ETLARYSPTP NGNAMGGGMG GISGFGRGLL MARRLVESGV PFVEVDFGGW
DLHNDVFNSL KNRMLPQLDA GISALVTDLK ERGMLDNTVI VWMGEFGRTP RINQNTGRDH
WAASWSTMIG GGGLRGGVAV GETDSDGIAV ASGKSYLPGD IWATAAHALG IPLDTVHTSK
RGRPMKIANG GTPIKELIS