Gene Plim_0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0477 
Symbol 
ID9137142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp605519 
End bp606256 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content55% 
IMG OID 
Productribosomal protein L3 
Protein accessionYP_003628525 
Protein GI296120747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATGA ACAGTCCGCT AGGTTTTAAG GTGTTCGGTA TGTCGTGCGG ATTGTTAGGT 
CGCAAAGTTG GTATGACTCA GGTCTTTACC CCTCAAGGTG AAGCGATTCC TGTGACCGTC 
ATTGAGTGTG GTCCCTGTGT CGTGCTCCAG ATTCGCACTG TTGAGCGTGA TGGCTACTCA 
GCGGTTCAGT TGGGGTTTTC TGATAAGCCT CGTCGCCTCG CATCTCGCTC AGAGCGAGGG 
CATGTGGCTG CGATTGATAG CAAGAGGCGA AAGTCGCTTG CTGCCGCTGG TGTGGCACTT 
GCGGAAAAGG CGGATTGCGA ACCCAAGCGA TTCGTTCGAG AGTTTCGCGT CACCCCCGAA 
GAGGCCTCCG CTTTTACTGT TGGTCAGGTG CTGACGGTCT CCCAGATCTT TGGTGAAGTG 
AAGCACGTTG ATGTGGTGGG GACTTCGAAG GGTCGCGGGT TTGCCGGTGT TATGAAGCGG 
CATAACTTCC ACGGTACTTG TGCGAGCCAT GGTGTTAAGA AGGTGCACCG CTCTGGTGGG 
TCAACTGGTC AGAGTACGGA TCCGGGTAAG GTCTTCAAAG GAACGAAGAT GCCCGGGCAC 
TACGGCGATG CTCAGGTCAC TGTCCGTCGG CTCCAGGTTG TGAGAGCTGA TGATGAAAAT 
AATGTGCTGC TGGTACGCGG CGCAGTTCCT GGTTATAGCG GCGGGTTTGT GCGAGTGCGG 
AAGACGAACT GTAAGTAG
 
Protein sequence
MAMNSPLGFK VFGMSCGLLG RKVGMTQVFT PQGEAIPVTV IECGPCVVLQ IRTVERDGYS 
AVQLGFSDKP RRLASRSERG HVAAIDSKRR KSLAAAGVAL AEKADCEPKR FVREFRVTPE 
EASAFTVGQV LTVSQIFGEV KHVDVVGTSK GRGFAGVMKR HNFHGTCASH GVKKVHRSGG 
STGQSTDPGK VFKGTKMPGH YGDAQVTVRR LQVVRADDEN NVLLVRGAVP GYSGGFVRVR 
KTNCK