| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0454 |
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| Symbol | |
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| ID | 9137119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 566865 |
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| End bp | 567509 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003628503 |
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| Protein GI | 296120725 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCATCAGC CCATCAGCGA ACTCACCCGA GCGATGTCTG CTGGATCTGT GAAGGCTATT
GAAGAGTTCT ATCGGGAATA CTTTCCACAA ATTTACCGAA CGGCTCGGCG CATCACCGGA
CGCGACGAGT CGTTCGGTCT CGATGTGGTG CAGGAAGCCA TGCTGCGAAT TCTCCGCTGT
ATTAAGCCGA TAGAGAATCA ACAGCATCTC ACTGCATGGC TGGATCTGGT GGTGAAATCG
ACAGCTTACG ATCTGCTCAA AGCGGAAGCC CGCCGCCAGA AGCGAGAACA AACGGCGGTT
CAAGGCCGAC AGCTGACAGT TGGCATAGTG CCTGCCGCAC TGGCTGGTGA CGAGGAAGCG
CATGACCGCC TGGTCTGGTT ACGACAACAG CTCTCACAAT TCGATCCGGA ACTCGCTCAG
ATGATTGATC TGCGCTATCA ACAATCGTGG ACACTCGACC GCATGGCTGA GTTTCTAGGA
TTGTCGATCG CGACGGTCGA TGGCAGGCTG CGTCGAGCCA TTAATCGATT GAAGAAAGCC
GCAATGTCTC AGGGTGCATT CGAAGAGATT ACGACTTCAA TACCAGGCTA TCCATGCGAA
ACCATTCGTC CTGCCATCAA CGGGGGAGGA AGTTATGATC GATGA
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| Protein sequence | MHQPISELTR AMSAGSVKAI EEFYREYFPQ IYRTARRITG RDESFGLDVV QEAMLRILRC
IKPIENQQHL TAWLDLVVKS TAYDLLKAEA RRQKREQTAV QGRQLTVGIV PAALAGDEEA
HDRLVWLRQQ LSQFDPELAQ MIDLRYQQSW TLDRMAEFLG LSIATVDGRL RRAINRLKKA
AMSQGAFEEI TTSIPGYPCE TIRPAINGGG SYDR
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