Gene Plim_0452 details

Gene Information

• Locus tag: Plim_0452
• ID: 9137117
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 565472
• End bp: 566248
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 57%
• Product: alanine racemase domain protein
• Protein accession: YP_003628501
• Protein GI: 296120723

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACCTCA AGAGTGTGGA ACAGGAGATC ATCCGGTCTT GCGAGAAGTC TGGTCGTCTC 
CCGAACGAAG TGACGCTGAT TGCTGTCACG AAATACGTTC ACGCGCCGGT GATTGCCGCC 
CTGTATGATT TGGGTGTGCG CGATGTCGGC GAAAGTCGCC CGCAGAACCT GGCTCTCCGC 
CGCTGTGAAG TCGAGGCTTT GTTCCCATCC ACTACCAGCG GTTCGACTCG TGACGAGGGG 
ACATTAGCCG ATTTGAAATG GCATCTGATT GGTCATTTGC AGCGAAATAA AGCCGAGCTC 
GCAGTCAGTA AAGCGGATGC GATCCATTCG TGCGATAGCG AACGACTGCT GACGAGGCTG 
GATCAACTTT TATCGGCCAC GCCGCGTCCA TTGCCCCTCT TCCTCGAGAT CAACATCAGT 
GGAGAAGTCT CGAAGCATGG ATTCACACCC GATGAAGCGC GAGCCTGGTG GCGAGCGCAG 
GCTGTCGAGC GTCCAGCAGG TTGTATGGCC CAGAGCCACC TGCCTGTCGG CCTGATGACA 
ATGGCCCCGA TCGATGCTTC GCCGGCAGAA CTCGTGCAGA TTTTCAGCGG CCTCAAGGAC 
CTGAAAATCG AGTTGGAAGC GATGTCCTCG GAGCATCGCT TGCCATGGCT TTCGATGGGC 
ATGAGTGGCG ATTTTCCCAT CGCGATCGAA TGCGGTGCCA CACATGTGCG TGTGGGCTCC 
CGGCTTTATC AAGGTCTGTC AAATCGCTGC TTCCTCAACG ACACGCCACC AGCCTGA 

 

Protein sequence

MNLKSVEQEI IRSCEKSGRL PNEVTLIAVT KYVHAPVIAA LYDLGVRDVG ESRPQNLALR 
RCEVEALFPS TTSGSTRDEG TLADLKWHLI GHLQRNKAEL AVSKADAIHS CDSERLLTRL 
DQLLSATPRP LPLFLEINIS GEVSKHGFTP DEARAWWRAQ AVERPAGCMA QSHLPVGLMT 
MAPIDASPAE LVQIFSGLKD LKIELEAMSS EHRLPWLSMG MSGDFPIAIE CGATHVRVGS 
RLYQGLSNRC FLNDTPPA