| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0378 |
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| Symbol | |
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| ID | 9137037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 468753 |
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| End bp | 471956 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | protein of unknown function DUF1549 |
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| Protein accession | YP_003628428 |
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| Protein GI | 296120650 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00109161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTTC TCCATCGTTT TTTTATCAGC ACCCTGACCG CTCTGCTGAT TGCGACAGTG
ATTGCCTCCA GCAACCTGGG AGTCCAAGAG GCACAAGGCG AGAATGAAAG TCCTGCAAAG
CCTTCTGCAA ACCTTCAAAC GTCTAACAAG TTGCAGTTCA ATCGCGATAT TCGTCCGATT
CTTTCTGATC GATGTTTTCA TTGCCATGGG CCGGATAGTG CCACTCGCGC AGCCGGCTTG
AGACTCGATC AAAGAGAAGA AGCTGTTCGT GCGAAGGCGA TTCACCTCGA CCAACTGGAT
CAAAGCGAGT TGCTGGTACG GATCTCATCC GACGATCCCG ATCTGGTCAT GCCTCCGCCC
TCACTGAAGA AACCACTCTC AGCGACTCAA AAGGCCACCT TGAAACAATG GGTGCTCGCA
GGAGCCGAGT ATCAGCCCCA TTGGTCCTTT ATTCCTGTCC CTCAGACAAT TTCCACTCCT
GCAGAAACTC AATCGCAATT CGTTGAGAAG CCGCCCATTG ATCAGTTCAT TGAGGCTCGC
CTGGCCGAAG TCGGCTGGCA ACCATCTCCT CCAGCCACAC GACTGGCTTG GCTGCGTCGC
GTCACGCTGG ACCTCACGGG ACTTCCCCCA TCAACCGTCG AAATCGAGCA ATTTCTCTCG
CTGGCCGATT CTCCTGAAAC TCGTAGAGCT GTGGTCGATC GCTTGTTTTC AACACCCGCC
TACGCCGAGC GGATGACCAA CGAGTGGCTC GATCTCGCCC GCTATGCCGA TACTTTCGGC
TATCAAGCCG ACCGGGAAAT GCACGTCTGG CCCTGGCGCG ACTGGGTGAT TCGCGCGTAC
TCAAAGAATC TTTCTTACCG CGATTTTCTC ACCTGGCAGG TCGCAGGAGA TCTCCTTCCC
CAGGCCACGC AAGAACAAAA GCTGGCCACC GCTTTCAATC GCCTGCACCG ACAGACCAAC
GAAGGGGGAA GTGTCGAAGA AGAGTTTCGC ATCGAATATG TCTCAGATCG CGTGCGAACC
ATCGGGACAG CGGCACTCGG CCTCACCATG GAATGTTGCC GCTGTCATGA TCACAAGTAC
GACCCGATTT CCCAAAAGGA GTTCTACGCA CTTAGTGCTT TCTTCGCGAA CATCGACGAG
CACGGCCTGT ACTCCCATTT CACAGAAACG GCCCCCACGC CCGCCCTGCC ACTTTTTGCC
GATGGGCAGC AGGCACAGCA TGAAAAACTG CTGCAAGAAA TCCAACAGGC CGCTACAGCT
TTGAAAGAAG TCGAAAGCCA GTTGATCACT CAACGTGAGG AGTCACAGCT CAACGCCAAA
AATGAACCCA TGCCAATTCA ACCAGTTGAA CCGGTCGCCC AGTTTGATTT TGAGGGGATT
TCGCCCGGCG GAACCAACAA GCTGGTCGAC AGCCGCAAGA CTGCCAGCGG ACAAGATCGT
GGCCAGGCGA TCGAGTTCAG TGGCGATGAC GAATACAAAC TCAAAGAAGT GGGGAACTTT
GCCCGAACTT CCCCGTTCAG CCTTTCCATG TGGTTGAAGC CCGCGGAGCA TAAGCCCCGC
ATGGTGATCG CGCACTGTTC ACAAGCGGCC GAAGATTCTG CCTTCCGAGG TTATGCGTTT
ACTCTTGATG AAGGTCGTCC CACCTTCTCA CTGATTCATT TCTGGCCAGG TAATGCCATT
CGAGTCCAGG CACCGAACGT ATTGCCGCTG GGTCAATGGT CACATGTGGC AATCACTTAT
GATGGTTCGA GCAAAGCCTC CGGTGTGCAG ATCTATCTCG ATTGCCAGCC ACTTTCGCTG
GTTGTCGAGC GCGATAAACT CACGCGCGAT ATCCGCCATC GATCCGAATG GGGCGATTCG
GCGGCTGGAA GTTTAACTCT CTCACTAGGT GCCCGCTTTC GTGACATCGG CTTCTCCCAA
GGGCAGCTGG ATGACCTGAA AATCTTCGAC GTGGAATTGT CGCAGGCCGA GATTGCTCAA
CTGGCCGAAG CGAAAGCAGA AGAACTCTCC CTCGCAAAAA ACTCGTCCCG ACCACTCCAC
TGGCTCAGGG TTCAACCCGA GTGGAAGGAG GCCTTTTCCA AACTCGCTTC TGCTCGAGTC
GCAGAAGACG ATTTCATCAC TCGCATCAAA CAAATCATGG TGATGGAAGA GCTTCCCGGC
ATGAGACCAA CCCATTTGCT TAAGCGTGGT GAATATCTTC AGCCAGCAGA AGTCGTGCAG
CCGGATGTCC CGCAGGCTAT TGGATCATTA AAGCCTGAAT GGCCCCGCAA TCGACTGGGG
TTAGCCTACT GGCTGGTTGA TGATGCGAAC CCACTGACGG CTCGTGTGGC TGTTAATCGA
CTGTGGCAGC TAGCTTTCGG TCGAGGGTTG GTCGCCACAC CTGAGGATTA TGGCAGCCAG
GGAGCATTAC CCAGTCATCC TGAACTGCTG GACTGGCTGG CACGCGATTT CATGGATCAC
GGTTGGGACC TGCAGCACAC GCTACGGCAG ATTGTTCTTT CGGATGCCTA CGCGCGATCG
GCAACCCCGG TCGATGTCGC CTACTATTCG GCAGATCCGG AAAATCGATT ACTGGCTCGT
GGACCCCGGT TTCGTCTCTC ATCAGAAATG CTGCGCGATC AGGCACTTGC GGTGAGTGGC
CTCTTGATCA CAAAAGTGGG CGGGCCCAGC GTTTACCCCT ATCAACCGGC TGGACTTTGG
GAAGAAGCGG GAACAGGAAA AAGCTATCCC AAGGTGGGAG GTGAGCACCT TTACCGCCGG
AGTATGTACA CCTTCTGGCG GAGGATTCTG CCTCCACCAT CCATGAGCAC CTTTGACGCC
CCCAGCCGAG AAAGCTGCAT TGCGAAACGC GAGCGCACCA GCACGCCGCT CCAGGCACTG
GTGTTGATGA ACGATCCCCA GTTCATCGAG GCAGCGAGAG TTTACGCCGA GAATCTCAGC
CTTGCGCATG CAGCTCCTGC TGATCGGGTG AAAGTCGCCT ATACGGCACT CCTTACACGC
GAACCGAGTT CTCGCGAACT GGAGTTGCTA CTGGCATTCT ATGACCAGCA GGTGGCCACT
TATCAATCTC AGCCAGAGAC CACCGCCGAA CTCTTAAAGA TCGGCGAGAA GCCAGCCTCA
GGCAAAGTCT CGCCCGCTCA GCACGCCGCT CTCACCCAGG TCATCCTGCT GTTGTTCAGC
CATGATGATG GGGTTTCGAG ATAA
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| Protein sequence | MPFLHRFFIS TLTALLIATV IASSNLGVQE AQGENESPAK PSANLQTSNK LQFNRDIRPI
LSDRCFHCHG PDSATRAAGL RLDQREEAVR AKAIHLDQLD QSELLVRISS DDPDLVMPPP
SLKKPLSATQ KATLKQWVLA GAEYQPHWSF IPVPQTISTP AETQSQFVEK PPIDQFIEAR
LAEVGWQPSP PATRLAWLRR VTLDLTGLPP STVEIEQFLS LADSPETRRA VVDRLFSTPA
YAERMTNEWL DLARYADTFG YQADREMHVW PWRDWVIRAY SKNLSYRDFL TWQVAGDLLP
QATQEQKLAT AFNRLHRQTN EGGSVEEEFR IEYVSDRVRT IGTAALGLTM ECCRCHDHKY
DPISQKEFYA LSAFFANIDE HGLYSHFTET APTPALPLFA DGQQAQHEKL LQEIQQAATA
LKEVESQLIT QREESQLNAK NEPMPIQPVE PVAQFDFEGI SPGGTNKLVD SRKTASGQDR
GQAIEFSGDD EYKLKEVGNF ARTSPFSLSM WLKPAEHKPR MVIAHCSQAA EDSAFRGYAF
TLDEGRPTFS LIHFWPGNAI RVQAPNVLPL GQWSHVAITY DGSSKASGVQ IYLDCQPLSL
VVERDKLTRD IRHRSEWGDS AAGSLTLSLG ARFRDIGFSQ GQLDDLKIFD VELSQAEIAQ
LAEAKAEELS LAKNSSRPLH WLRVQPEWKE AFSKLASARV AEDDFITRIK QIMVMEELPG
MRPTHLLKRG EYLQPAEVVQ PDVPQAIGSL KPEWPRNRLG LAYWLVDDAN PLTARVAVNR
LWQLAFGRGL VATPEDYGSQ GALPSHPELL DWLARDFMDH GWDLQHTLRQ IVLSDAYARS
ATPVDVAYYS ADPENRLLAR GPRFRLSSEM LRDQALAVSG LLITKVGGPS VYPYQPAGLW
EEAGTGKSYP KVGGEHLYRR SMYTFWRRIL PPPSMSTFDA PSRESCIAKR ERTSTPLQAL
VLMNDPQFIE AARVYAENLS LAHAAPADRV KVAYTALLTR EPSSRELELL LAFYDQQVAT
YQSQPETTAE LLKIGEKPAS GKVSPAQHAA LTQVILLLFS HDDGVSR
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