Gene Plim_0364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0364 
Symbol 
ID9137023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp450865 
End bp452346 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content54% 
IMG OID 
ProductMale sterility domain protein 
Protein accessionYP_003628414 
Protein GI296120636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATC AACTTCTGAC GGGTGCGACA GGTCTGCTGG GAACCTACCT TCTGCGCGAT 
CTGCTGATGG CAGGAACGCG GGTGGCTGTG GTTGTGCGGC CCAACCGTCG ACAGAACGTT
CGCCAGCGAG TCGAAACGTT AATGACCTAC TGGGATGAAA CTTTGGGGAC AAAACTTCCC
CGCCCGGTCG TACTCGAAGG AGATATTTCC CAAGCCGACC TGGGGCTCGA TGCTGTCAGC
ATGCGCTGGG CAGCCGAACA TGTCACCGGT GTGATTCATA ATGCCGCCAG CCTCTCTTTC
GTGGCAACCA GCGAAGATGG CGAGCCATAC CGATCAAACA TTGGTGGGAC TCGACATGTT
CTCGAGTTTT GTCGGAGCCT GGGAATTCGA CAATTCTTCC ACGTCTCGAC AGCCTACATT
GCCGGCCAGC GTCAAGGGCG TGTTCTGGAG ACAGAACTGG ATGTTGGTCA GGAGCTTTCC
AACGCTTATG AAGAAAGTAA GCTCGCTTCG GAAAAGATGG TTCGCGAAGC TGATTTTCTG
GATTCACCGA CCGTTTTCCG GCCCGGGATC ATTATTGGTG ATTCGGTCAC TGGGTACACC
ACAACCTATC ATGGTTACTA CGCCGCCCTG CAGCTTTGCA ACACGATTGT GAAGACTTTC
AATGCTGACG AAACGGGCCT GGTCGGGGCT CAAAAAGTAC GGCTGGCACT CAATGGCAAT
GAAACCAAAC ATCTGGTGCC TGTCGATTGG GTCTCAGCAG TCATGGCCCA TGTGATCACA
CACCCGGAGC ACCATGGCCA GACATACCAT CTCACGCCAC AGCATCCGGT GACAATCCGC
ATGATCCGCG ACATCCTGGA AGAGACCTGT CATTTCTATG ACACACATCT CGTGGGAGTC
GGAACGACTC TCGACAAGAT GAGCGAAGCT GAAAGTATCT TCTACGAGCA CATCCGGGTT
TATAACTCCT ATTGGAAGAA TGACCCGAGC TTTGATCGAA CCAATACTCT CAAAGCCGCT
CCACACCTAC CCTGCCCGGC GGTGAATCGA CGTCGGCTCG TCGAGCTTTC GAAGATCGTC
ATTCGCGATG GATTTCCATC TCCCAGCAAG CGTCCTGTCG ATCCTGAATT CGATTCGGCC
GCATTCTTCC AGCAGATGCT GGATCAGGCC GCACGAGATC CTCAGTATGA CGAGCAGGAT
CGCAGCATCA GCCTGAATCT TTTGGGTAAT GGTGGCGGCC AATGGCATTT ACGAATTCGC
CAGGGGAACA TCGTTGGAGC TGAAATTGGT CTTAATGACG ATTCCGACGC TCTGGTGGAA
ATGACCATCG ACAGCTTTGC TCAACTCGTT GCGGGCCAGA AAACCATGGG CCAGTTGGTC
GCTGAGTCTG CTGTTCGAGC CAGTCAGGAG CGAGCCGAAG AAGATCTCCT TTCTGTCCTT
GACCAACTCT CTCAGCAGGA AGTGGCTGAA GTGCAGAAGT AA
 
Protein sequence
MSYQLLTGAT GLLGTYLLRD LLMAGTRVAV VVRPNRRQNV RQRVETLMTY WDETLGTKLP 
RPVVLEGDIS QADLGLDAVS MRWAAEHVTG VIHNAASLSF VATSEDGEPY RSNIGGTRHV
LEFCRSLGIR QFFHVSTAYI AGQRQGRVLE TELDVGQELS NAYEESKLAS EKMVREADFL
DSPTVFRPGI IIGDSVTGYT TTYHGYYAAL QLCNTIVKTF NADETGLVGA QKVRLALNGN
ETKHLVPVDW VSAVMAHVIT HPEHHGQTYH LTPQHPVTIR MIRDILEETC HFYDTHLVGV
GTTLDKMSEA ESIFYEHIRV YNSYWKNDPS FDRTNTLKAA PHLPCPAVNR RRLVELSKIV
IRDGFPSPSK RPVDPEFDSA AFFQQMLDQA ARDPQYDEQD RSISLNLLGN GGGQWHLRIR
QGNIVGAEIG LNDDSDALVE MTIDSFAQLV AGQKTMGQLV AESAVRASQE RAEEDLLSVL
DQLSQQEVAE VQK