Gene Plim_0344 details

Gene Information

• Locus tag: Plim_0344
• ID: 9137003
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 428663
• End bp: 429262
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 53%
• Product: AAA-4 family protein
• Protein accession: YP_003628394
• Protein GI: 296120616

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACTCCTA TTTCGACGCT GCCATACGAA CAATCTCTGC TTGCGTTGAT TCGCAAAGGT 
GAGAGCGTCG AGCTTGAACT GAAAACGACC GTTCCGAGTC CGACCGCGCT CGCACAACTC 
ATCTCTGGAT TTGCAAACGC ATCAGGCGGC ACAATCATCA TTGGCGTGCA AGAGCCAGAT 
ACCGTTGTCG GATGCGACTG GCAGACCGTT TCTCGGGCAT TTGAAAGAGC GCAGCAACAA 
CTAAACCCAG TACCGGATTG CTACCTTCAT CAGGCGACGA TTTCAGGCAA GATTGTCGGT 
GTCCTGAATA TCGCGAAATC GTCGAAGCCA GTGGTGTCAT CAGGTGGAGC GTTTGTTCGC 
GAGGGAGATC GCACTCGTCC GATTACCGCA CCAGAGATCG AGCAGCGCTT GGCCACGCCC 
GGTGCAATTG ATACATCGGC GATTTCAAAA GCGTTGGCGG ACAATACTGC AACAATTGAA 
CGGCTCACCG CAGCGATTTC TCGCGCCCAA AGCCTTCATG GGCAGTGGCT TGGTTACGCA 
ATCGGGTTTG TGTTGGGTAT CTTGCTTCTG TCATTGCAAG CTTCATCTAC GCCGTCCTAA 

 

Protein sequence

MTPISTLPYE QSLLALIRKG ESVELELKTT VPSPTALAQL ISGFANASGG TIIIGVQEPD 
TVVGCDWQTV SRAFERAQQQ LNPVPDCYLH QATISGKIVG VLNIAKSSKP VVSSGGAFVR 
EGDRTRPITA PEIEQRLATP GAIDTSAISK ALADNTATIE RLTAAISRAQ SLHGQWLGYA 
IGFVLGILLL SLQASSTPS