Gene Plim_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0342 
Symbol 
ID9137001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp426494 
End bp427582 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628392 
Protein GI296120614 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACGC TTCCTCCAAC GACGTTTTCT CCAGATTACG CCACTGCCCG GCAGCGATTT 
CAGCAATCAG CGTCTCGGCT CGGCTGGAGG TTGGAGTCCT ATTCGATCGG TCTTCATGGC
CCGACTGGCG AAGAGTTAGA GTTCGATGTC GCCCTATCGC ATGGCGAAGT GACCGACAAG
GTTCTGGTCG TTTCATCGGG TCTGCATGGC GTCGAAGGAT TTTTTGGCTC AGCAGTCCAG
GTGGCCTGTA TGGAGCATTG GCTCAGTACC GAAGCTCCCT CGGTGAAATG TCTCTTTCTC
CATGGGCTCA ACGCCTATGG ATTTGCCTGG CTTCGTCGCT TCGATGAAAG CAATGTAGAC
CCTAATCGCA ACTTTCTGCT TCCCGGCGAA CACTTCGAAG GTGCTCCGGA TGGTTATCAG
CAGCTGGATC GATTTCTGAA CCCGCGACAT TCCCCATCAC CATGGGAACC ATTCACCTTA
AAGGCTTTGT GGCTGATTGC TCGCTACGGC ATGCCGGCAC TGAGGCAGTC GATTGCCGGC
GGACAATACA CGTTCCCTCA AGGTCTTTTC TTCGGTGGAA AGGGGCCATC ACGCTCACAG
CAAATTCTAC GTGAACACAT GCCGCTCTGG CTCAATGGAT GCCGGCAGGT CGCTCATCTC
GACTTTCATA CGGGATTAGG CCGCTTTACT ACTCACAAGC TGTTAATCGA TTACCCCTTG
AGTGAAGCGC AGCGAAACTG GTTCTCCCAC TGGTTTGGTG CCGATTCCTT TGAAGCCATC
GATTCGGCTG AGATGGCTTA CGAGGCCCGC GGTGGATTTG GCCGCTGGTG TGTCTCGCAA
CGGTTAGCTG CCAACTACCT GTTTGCCTGC GCTGAGTTCG GTACTTACGG TGGGATTCAA
GTTTTAGCAG GCTTAAGGGC TGAAAATCAG GCCCATCATT GGGGCAGCCC GCAAGATCCA
TCGACGATCC GGGCGAAACG ACGCTTGATG GAGCTGTTTT GCCCGGCATC ACCAACATGG
CGATCCCAAT GTGTCACGTC TGGGCAAAGA TTGATTGAGC AGGCCCTGCA AGGATTATTG
CAATCATGA
 
Protein sequence
MTTLPPTTFS PDYATARQRF QQSASRLGWR LESYSIGLHG PTGEELEFDV ALSHGEVTDK 
VLVVSSGLHG VEGFFGSAVQ VACMEHWLST EAPSVKCLFL HGLNAYGFAW LRRFDESNVD
PNRNFLLPGE HFEGAPDGYQ QLDRFLNPRH SPSPWEPFTL KALWLIARYG MPALRQSIAG
GQYTFPQGLF FGGKGPSRSQ QILREHMPLW LNGCRQVAHL DFHTGLGRFT THKLLIDYPL
SEAQRNWFSH WFGADSFEAI DSAEMAYEAR GGFGRWCVSQ RLAANYLFAC AEFGTYGGIQ
VLAGLRAENQ AHHWGSPQDP STIRAKRRLM ELFCPASPTW RSQCVTSGQR LIEQALQGLL
QS