| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0330 |
|---|
| Symbol | |
|---|
| ID | 9136988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 410141 |
|---|
| End bp | 410731 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | intracellular protease, PfpI family |
|---|
| Protein accession | YP_003628380 |
|---|
| Protein GI | 296120602 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAGA TTCTGATCAT CGCCGGTGAT TTCGTCGAAG ATTACGAGTT GATGGTTCCC
TACCAGATGC TGCAGCTTCT GGGCTGTGAG GTCGATGTCG TCTGCCCTGA TCGACGCGCT
GGTGATTTCA TCAAAACCGC GATTCACGAT TTTGAAGGGG ATCAGACCTA TAGCGAAAAG
CCAGGACATC GATTCACTTT AAATGCCGAA CTTGATGAGG CAGCCACTCA GCAATCAACT
TATGACGGTC TCTATCTCCC CGGCGGCCGC TCTCCTGAGT ACCTGCGGCT TGATCAGCGA
GTGCTCGATC TGGTGAAGCA TTTCTTTGAA GCAGCCAAGC CAGTGGCTGC CATTTGCCAT
GGTATTCAGA TATTAACCGC CGCCAGAGTG ATGAGCGGCC GTCGCTGTAC CGCCTATCCC
GCCTGTGGCC CGGAGATCAC ATTGGCGCAA GGGCAATATG TCGCCACGCC CGTCAATGAA
GCCTATGTCG AAGGCAACCT GGTCACAGCT CCTGCCTGGC CGGCCCATGC TGCCTTGATC
GGTGAGTTCG CGAAACTGCT GGGGATTACC ATCAGCCATT CGAAGGCTTA A
|
|---|
| Protein sequence | MPKILIIAGD FVEDYELMVP YQMLQLLGCE VDVVCPDRRA GDFIKTAIHD FEGDQTYSEK
PGHRFTLNAE LDEAATQQST YDGLYLPGGR SPEYLRLDQR VLDLVKHFFE AAKPVAAICH
GIQILTAARV MSGRRCTAYP ACGPEITLAQ GQYVATPVNE AYVEGNLVTA PAWPAHAALI
GEFAKLLGIT ISHSKA
|
|---|
| |