Gene Plim_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0290 
Symbol 
ID9136945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp367710 
End bp368645 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content57% 
IMG OID 
Productagmatinase 
Protein accessionYP_003628340 
Protein GI296120562 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAACT CACCATTCTG CGGGATTGCT TCTTTTGGGC GGCAGGAGAT TTGTCTGGCA 
CCTGTTGCGG GCCGGAATGT TGATGTTGCG GTGCTGGGGT GCCCTTTTGA CTCTTCGGTC
AGCTATCGCT CGGGAACGAG GTTTGGTCCG CGGGCGATAC GGGAACAGTC GATGATGCTC
TGGGGGTATC ACAACGCTCT GAACATCGCC CCGTTCGATG TCCTCAAGGT GGTCGATGCC
GGCGATGTGG ATGTCATCCC GGTCGATATT GCCCGTACAC ACGCATTGAT CGAACAAGCG
GCCAGAGCCT GGATTGATCA AGGCACAATG GTCCTGGGAC TGGGCGGCGA ACATTCCGTC
GCATTACCCT TGCTGAAAGC GGCCGCCGCA AAACATGGGC CGCTCGCCGT CGTGCATTTC
GATGCACACG GCGACACCTG GACGGAAGAG TATCCGGGCT ATCCACTCAG CCATGGCACA
CCTTTTATTC GAGCCATTGA AGCGGGTGCG ATTGATACTC AGCGCTACTT TCAGATTGGT
ATTCGCGGGC CGACCTATTC GGCCAGCGAT TACCTCGATG CCCGGGCTTT AGGAGCACGC
ATTATCTCTG CCGATGACGT GGGAGAGCGC GGCGTGCGCT CGATTGTGGA CGAAATCCGC
CAGCAGGTGG GTAATCAGCC GGTCTATCTT TCCTTCGACG TCGATGCCCT CGACCCGGCA
TTTGCACCGG GGACGGGGAC TCCCGAAATT GGTGGGTTAA CCAGTCGTGA AGCCACTGGA
ATTCTGCGTG GGCTGGCAGG CCTGAGAATT GTTGGCGGAG ATGTCGTCGA AGTCAGCCCC
CCTTACGATC CTTCAGCCAT TACCTCGGTA TTGGGTGCCA ATCTCGCTTT TGAAATGCTG
GCACTCATTG CGAAATCAAA ATCATCGAGC CAGTAA
 
Protein sequence
MSNSPFCGIA SFGRQEICLA PVAGRNVDVA VLGCPFDSSV SYRSGTRFGP RAIREQSMML 
WGYHNALNIA PFDVLKVVDA GDVDVIPVDI ARTHALIEQA ARAWIDQGTM VLGLGGEHSV
ALPLLKAAAA KHGPLAVVHF DAHGDTWTEE YPGYPLSHGT PFIRAIEAGA IDTQRYFQIG
IRGPTYSASD YLDARALGAR IISADDVGER GVRSIVDEIR QQVGNQPVYL SFDVDALDPA
FAPGTGTPEI GGLTSREATG ILRGLAGLRI VGGDVVEVSP PYDPSAITSV LGANLAFEML
ALIAKSKSSS Q