Gene Plim_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0258 
Symbol 
ID9136913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp327445 
End bp328707 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content56% 
IMG OID 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_003628309 
Protein GI296120531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCCGTC CATTAACGCG TGCGAACATC TCTCCGGTGA AGCCACTGTT TTCCGTTGGC 
TGGCTCAGTG CAGGGCTGAT TCTGGCGCTG GGGATCCATG CGAATCATCG ACTGCTTGCC
GAAGACTGGC GGCAATTTCG CGGGAGTTCC AGTACGGCAA TCTCCCGCAG TGCCGCACCA
CCCGTCGAGT TTGACAGCAG TGGCAAAAAT GTGGCATGGA AGGTCGATCT TCCCGGCCGT
GGCCTTTCCA GCCCGATCAT TATCGATGAC CGGGTCGTCG TGACAGCAAG TTCCGGCCCC
AGGCAGGACA ATCTGCACAT CCTCTGCTTC AAAGCGAGTA CAGGAGAATT ACTTTGGGAA
CGCCGATTTC TGGCGACAGG CCGCAGCCTG ACGCATCCCA AAACCTGCAA TGCAGCTCCC
ACTCCCGCCA GTGATGGCGA GAAGATCTTC GCCTTTTTCT CCAGCAACGA TGTGATCTGT
CTCGACCTTA CGGGCCAGTT GCTCTGGATG CGCGGCCTGA CACTCGATTA CCCCAATGCC
AGTAACAGTC TGGGCATGTC TTCCTCTCCG GTGGTGGCGG GTGATGTCCT GGTGACACAG
GTCGAGAATG ACAGCGAATC GCTCACGACC GGGCTCAACA CCTCAACGGG TGAAACCCTC
TGGAAACTGG ACCGCCCCAG GCGAGCGAAC TGGACATCGC CACTCCTCCT GGCCGATGGC
CAGACAGTGC TGCTCCAGTC CTCCAAAGGC GCCGATGCTG TCGATGCCCG AACAGGAAAC
ATCCTGTGGT CATTTGGTGA AGGGGCCGCC ACCATTCCTT CTTCAGCACG GGAAGGCGAG
ACGATCTTCA TTCCATCCAA TGGCTTGGTG GCACTCCGGC CTGCCAACTC GAATACGCCT
CCCGAAAAAC TCTGGCAGGA GAACAAACTC AAACCTGGAA CAGCCACGCC AGTGGTTGCG
GAAGGTAAAG TTTATTGTCT CTCAGGAGCG GGGGTCTTGC TCTGTGCGAA TGTCGATAAG
GGAGAACTCC TCTGGCAGTT GAGGCTCGAA GGTCCTTTCA GTGCTTCTCC AGTCATTGCT
GACCGTAAGC TTTATTGCGT CAATGAATCG GGTAAATGTT TTGTGGTCGA TCTCACTGGC
AGCAAAGGCA CCATCGTCGC TGAGAGTCTT CTGGATGAAA CGATCCTGGC CACGCCATCG
CTTTCTGATG GTGCTCTCTA TCTGCGAAGC GATGCCCACT TGTGGAAAAT CGCCACGCCA
TAG
 
Protein sequence
MVRPLTRANI SPVKPLFSVG WLSAGLILAL GIHANHRLLA EDWRQFRGSS STAISRSAAP 
PVEFDSSGKN VAWKVDLPGR GLSSPIIIDD RVVVTASSGP RQDNLHILCF KASTGELLWE
RRFLATGRSL THPKTCNAAP TPASDGEKIF AFFSSNDVIC LDLTGQLLWM RGLTLDYPNA
SNSLGMSSSP VVAGDVLVTQ VENDSESLTT GLNTSTGETL WKLDRPRRAN WTSPLLLADG
QTVLLQSSKG ADAVDARTGN ILWSFGEGAA TIPSSAREGE TIFIPSNGLV ALRPANSNTP
PEKLWQENKL KPGTATPVVA EGKVYCLSGA GVLLCANVDK GELLWQLRLE GPFSASPVIA
DRKLYCVNES GKCFVVDLTG SKGTIVAESL LDETILATPS LSDGALYLRS DAHLWKIATP