Gene Plim_0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0248 
Symbol 
ID9136903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp317521 
End bp318204 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628299 
Protein GI296120521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.021873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAT CGTCGAAGAA ACCCTCTAAG CCCAGTCCAT TTCGTCCTTT GCCGGCTTAT 
CCCGGGCCCT CGATTTCATG GTCGCCCATT GTTCCCAACC CGGAATGGGA AATGACGATC 
GCGGGTGATC TCTTCGAACA GCAAACCGAA CTGCTGGAAA AACTGGTCGA ACTTCCCCGG 
CGGTCAGCAG GCCTCATTTA CATCGACTCG TGCGGCGGGA ATGCGTATGT GGGCCTGGCA 
CTCGCTTCGA TCATTCGCTT ACGCGGTCTC CGGGCGGCGG CCGTGGTCAC AGGGGAATGC 
AGTTCGGCAG CACTGATGCC CTTAGCGGCC TGCCGGGAAC GCTATGTGAC GCCCCATGCT 
TCGCTGCTGT TTCATCCCAT TCGCTGGCAA TCCGATGACC AGCTCAAGCT GGAAGAAGCC 
GTCGAATGGG CCCGACATTT CCGCTGGATG GAGTCGGATC AGGATCAGCT ATTGGCTCGT 
TTGTTCAACT GCAGTGTCGA GTTGATTACC GAGTGGTCCC GACCAGGCCG CTTCCTTTCT 
GGAAGAGAAC TGGCGGATGC AGGTCTGGCA CATTTGCTCG ATCTGTTTGA CAGCCACGAC 
TTGTGGCAGC AGATCGAAAA ACACCGATTC GAGCAGGCTC ACAAAAAAGG CCCGGATCGA 
CAGACAGAAC TCGCCTGGGC GTAG
 
Protein sequence
MTKSSKKPSK PSPFRPLPAY PGPSISWSPI VPNPEWEMTI AGDLFEQQTE LLEKLVELPR 
RSAGLIYIDS CGGNAYVGLA LASIIRLRGL RAAAVVTGEC SSAALMPLAA CRERYVTPHA 
SLLFHPIRWQ SDDQLKLEEA VEWARHFRWM ESDQDQLLAR LFNCSVELIT EWSRPGRFLS 
GRELADAGLA HLLDLFDSHD LWQQIEKHRF EQAHKKGPDR QTELAWA