Gene Plim_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0231 
Symbol 
ID9136886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp296512 
End bp297303 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content53% 
IMG OID 
Productribonuclease III 
Protein accessionYP_003628282 
Protein GI296120504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.933376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAGG CCGCCGGGCA AGTGCCCCTG ACGGAATGCG AAGCCCGGCT GGGCTATCAT 
TTTCGCTCGC CCGAATTGCT GATGCAGGCC CTTTCACATG CCTCCGCTGC AAAAACGCGG
CTCGAATCGA ATGAGCGACT CGAATTTCTC GGCGATGCCA TTCTTGGTGC CGCCGTTTGT
GATCTGCTGT TTCGCAAATA TCCCAAATCG ACAGAAGGCG AACTGACACG GATCAAGTCG
TTTGTTGTCA GCCGGCATGT CTGTGGTTTG CTGGCGAAAG AACTTCATCT CGATCAATTT
GTCATCATTG GGAAGGGATT GTGCGGAACT CCCAATGTCC CGGTCTCTAT CTTATCGGCG
ACGTTCGAAT CCGTGATTGC TGCTGTCTTT CTCGATGGAG GTTTTGATGC GGCTAAAGAG
TTCATTATTC GACTGATCGA GCCTCATGTC GAACAGATGG TCGGTGCCGA ATATGGCCGC
AACTATAAAA GTGTTCTGCA GCAATACGCC CAGAAGACTT TGGGCGAAAC TCCGCGCTAC
GATCTGCTGA AGGAATATGG GCCAGACCAT TTGAAGTATT TCAAAGTCTC GGCTGCACTG
GGTGAAGTGG TTTACGCTGC CGCCTGGGGG ATCAACAAAA AAGAGGCCGA GCAGAAGGCC
GCGGCCAATG CCTTATCTGA ACTGGAAGGG AAACCAGCGC CTCACAGTGC CGATGAACTT
CCCCCTGAAA TCGCCAGGCT CCAGGCTTCC ACCGGGATGA ATCTTGCTCA GGAAGATATC
ATCTCCAGTT AA
 
Protein sequence
MDEAAGQVPL TECEARLGYH FRSPELLMQA LSHASAAKTR LESNERLEFL GDAILGAAVC 
DLLFRKYPKS TEGELTRIKS FVVSRHVCGL LAKELHLDQF VIIGKGLCGT PNVPVSILSA
TFESVIAAVF LDGGFDAAKE FIIRLIEPHV EQMVGAEYGR NYKSVLQQYA QKTLGETPRY
DLLKEYGPDH LKYFKVSAAL GEVVYAAAWG INKKEAEQKA AANALSELEG KPAPHSADEL
PPEIARLQAS TGMNLAQEDI ISS