Gene Plim_0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0177 
Symbol 
ID9136831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp232627 
End bp233028 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content56% 
IMG OID 
ProductATP synthase F1, epsilon subunit 
Protein accessionYP_003628228 
Protein GI296120450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.999255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTTG GTGACAGTTT GCGACTGACC GTTGTAACGC CTGAAAAACC GGTGATTGAC 
CAGGTGGTGC GGAGCGTTCA GTTCCCGCTG GCTGATGGTA TGACGGGTGT ACTTCCCGGT
CGCGCCCCAT TGATTGGCCG TCTGGGGTAT GACGAGCTGG TTTTCATCGA CGACAGTGGT
GAGTCGCGAT ACTTCGTGGA TGGTGGTTTT GTGCAGATCG CTCAGAACGT CGTCACGATT
CTGACATCTT CGTGTCGTCC TCTGGCGAGC CTGACCCGTG ACGAGGCCAG CAAGGTTCTC
GATGCGGCTC TTACCAAAAA GGCAACCTCT GATAACGAAG TCAGCCAACG CCAGAAGGAG
CAGAATCGAG CACGTCGCAT GCTGGCTCTG GCTGATCAGT AG
 
Protein sequence
MALGDSLRLT VVTPEKPVID QVVRSVQFPL ADGMTGVLPG RAPLIGRLGY DELVFIDDSG 
ESRYFVDGGF VQIAQNVVTI LTSSCRPLAS LTRDEASKVL DAALTKKATS DNEVSQRQKE
QNRARRMLAL ADQ