| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0176 |
|---|
| Symbol | |
|---|
| ID | 9136830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 231038 |
|---|
| End bp | 232483 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | ATP synthase F1, beta subunit |
|---|
| Protein accession | YP_003628227 |
|---|
| Protein GI | 296120449 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.792226 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCG CTGTTGCAAA TCACGTTGGC CGCGTTACGC AGGTCATCGG TTCGACGTTC
GATGCGGAGT TTGCCGAGGG CTCGCTCCCT CCGATCTACA ACGCCGTTAA GGTCGATGTG
GAAATTAAGG GGACACGAGT CAAGGTCGTG GGCGAAATCC AGCAGCATCT GGGTGGTGGC
CGAGTTCGCT GCGTCGCACT GGGTTCAACC GATGGTCTGG CCCGTGGTGT CGAAGTGATC
GATACTGGTG CACCACTCTC GGTTCCCGTC GGTAAAGGGA CTCTGGGCCG CGTCTTCAAC
GTGCTGGGTG AGCCGATTGA TGGCCGTGGC GAGGTCGCAG CCGAAGACCA CTGGCCCATC
CACCGCGATC CGCCCAAGCT CGAAGATCTC AGCTCCAAGA CCGAAATCTT CGAAACCGGG
ATCAAGGTGG TGGATCTGCT AATCCCCTTC GTCCGCGGTG GTAAAGCCGG TCTCTTCGGT
GGTGCCGGTC TGGGTAAGAC TGTGATTCTG CAGGAACTCA TCGCTCGTAT CGCCAGTACC
CACGGGGGTT ACTCGGTCTT TGCCGGCGTG GGTGAACGAA CCCGCGAAGG AAACGATCTC
TGGCTCGAAA TGCAGGAAAC ACAGATTGGC TCAACGGGTC GTGCGGTCAT CGAGCAGACC
TGTATGGTCT TTGGCCAGAT GAACGAGCCG CCGGGCGCCC GTCTCCGCGT GGCACTTTCC
GCACTGACCA TGGCTGAATG GTTCCGCGAC ACCACCGGTG CCGATACGCT GCTGTTCGTG
GATAACATTT TCCGATTCTC ACAGGCCGGT TCCGAAGTGT CGGCACTTCT GGGACGTATG
CCATCAGCAG TGGGTTATCA GCCAACTCTC TCAACCGAAC TGGGTGCTCT GCAGGAACGC
ATCACTTCGA CGAAACGTGG GGCGATTACG TCTGTGCAGG CTGTGTATGT TCCTGCGGAT
GATCCCACCG ACCCCGCACC AGCCACTGCC TTCTCGCACC TCGATGCGTT CATTTACCTC
GAGCGTAAGA TTGCCGAAAA GGGTCTTTAC CCCGCGATCG ATCCTCTCGC TTCTTCGAGC
CGTATTCTCG ACCCACAGAT TGTGGGCGAG CGGCATTATG CCTGTGCCCG CCGCGTGCAG
AAGATTCTGC AGCGATATCG CGAGCTTCAG GACATCATCG CGATTCTCGG TGTGGACGAA
TTGAGCGAAG ACGACAAGTT GGTCGTGAAG CGAGCCCGCC GTATTGAGCG ATTCCTGTCG
CAGCCCTTCT TCGTGGCCGA AGCCTTTACC GGGAAAAAGG GAAGCTTCAC GACACTGGCT
GATACGATTC GCAGCTTTGA AGAAATCTGC GATGGCAAGT GGGACGACCT GCCTGAAAGT
GCCTTCATGT ATGTGGGTGC CATTGAAGAA GCCGTGGCTC AGGCTGAGAA GATGGCTAAG
GCTTAA
|
|---|
| Protein sequence | MSTAVANHVG RVTQVIGSTF DAEFAEGSLP PIYNAVKVDV EIKGTRVKVV GEIQQHLGGG
RVRCVALGST DGLARGVEVI DTGAPLSVPV GKGTLGRVFN VLGEPIDGRG EVAAEDHWPI
HRDPPKLEDL SSKTEIFETG IKVVDLLIPF VRGGKAGLFG GAGLGKTVIL QELIARIAST
HGGYSVFAGV GERTREGNDL WLEMQETQIG STGRAVIEQT CMVFGQMNEP PGARLRVALS
ALTMAEWFRD TTGADTLLFV DNIFRFSQAG SEVSALLGRM PSAVGYQPTL STELGALQER
ITSTKRGAIT SVQAVYVPAD DPTDPAPATA FSHLDAFIYL ERKIAEKGLY PAIDPLASSS
RILDPQIVGE RHYACARRVQ KILQRYRELQ DIIAILGVDE LSEDDKLVVK RARRIERFLS
QPFFVAEAFT GKKGSFTTLA DTIRSFEEIC DGKWDDLPES AFMYVGAIEE AVAQAEKMAK
A
|
|---|
| |