| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0174 |
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| Symbol | |
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| ID | 9136828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 228354 |
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| End bp | 229865 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | ATP synthase F1, alpha subunit |
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| Protein accession | YP_003628225 |
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| Protein GI | 296120447 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.168157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCA ACGCGGACGA GATCGCTTCT GTTATTCAGC GTGAAATCCA GGATTTCCGC
GGACAAATCC AGACCAACGA AGTTGGTACG GTTGTGGAAG TGGGCGACGG TATTGCGCGC
GTCTATGGGC TCACCAACGC CATGTCTGGC GAAATGGTGG AGTTCTCCAG TGGCGTGCGC
GGTCAGGTCT TCAACCTGGA AGAAAACTCT GTCGGTGTGA TCATTCTGGG TAGCTACCTG
AAGATCTCCG AAGGGGATGA AGTCCGGGCA ACTGGCCAGT TGCTCTCCAT TCCCGTGGGT
GATGCCCTGA TTGGTCGCGT GGTTGATCCT CTGGGAAATG CCCTCGATGG TCGCGGCCCG
ATTATCGCTG AATCATCCCG CCCCCTCGAA ACAACCGCGC CAGGCGTGGC TGCCCGTCAA
CCTGTGAAGC AGCCCATGCA GACAGGAATC AAGGCTGTTG ATGCCATGAC CCCTGTGGGT
CGTGGTCAGC GCCAGCTCAT CATCGGTGAC CGCAAGACGG GCAAGACCGC TGTTGCAATC
GACGCCATCA TCAATCAAAA AGGTGGCGAC GTCATCTGCA TTTACGTCGC CTGTGGTCAG
CGGGCCAGTT CGATTGGCGG CGTGGTCGAA GCTCTGAAAG CCGCCGGCGC CATGGACTAC
ACGATTGTGG TGGCCGCGGG TGCTTCCGAC CCTGCCCCTC TGCAATACAT CGCCCCTTAT
GCAGGTGCTG CAATTGCTGA ATACTTCATG TATCAGGGCA AGCACACCCT GGTGGTGTAT
GACGATCTTT CCAAGCAGGC AGTCGCCTAC CGTCAGCTGT CACTGCTGAT GCGTCGTCCT
CCTGGTCGTG AAGCTTATCC CGGTGACGTA TTTTACTGTC ACAGTCGTCT GCTCGAACGA
GCTGCCAAGC TGAGTGATGA ACTTGGTGGC GGTTCGATGA CAGCGCTCCC GATCATCGAA
ACTCTCGAAG GGGAAGTTTC GGCCTATATT CCGACAAACG TGATTTCGAT CACCGACGGT
CAGATTTACC TGGAACCCGA CCTGTTCTTC GCGGGGGTTC GCCCTGCCAT CAACGTTGGT
ATTTCGGTCT CTCGCGTGGG TGGTAATGCT CAGACAAAGG GAATGAAAAA GGTCGCCGGT
AGCTTGCGAC TGGATTTGGC AGCCTTCCGA GAGCTCGAAG CGTTTGCTCA GTTGGGCACC
GAACTCGATG CCGCCACTCA GAAGCAGGTG GATCGCGGCT ACCGCATGGT CGAACTGCTC
AAGCAGCCAC AGTATGTGCC ACTCGCTGCC GCTGATCAGA TCGTGAGTAT TTACGCAGGG
ACTCGCGGTT ATTTCGATTC TGTACCAGTC AACCAGGTGG CAGAAGCTGA AAAGCAGCTG
CTGGAATACG TTCGTCTGGA ACACGCGGCA TTCCGTGAAA ATCTCATCAG CAGCAAGACG
CTCGATGATG CCCAGGAAGC TCAACTCAAG ACCATTCTGG AAGGATTCAA GAAACGCTGG
CAGCCAAAGT AG
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| Protein sequence | MKFNADEIAS VIQREIQDFR GQIQTNEVGT VVEVGDGIAR VYGLTNAMSG EMVEFSSGVR
GQVFNLEENS VGVIILGSYL KISEGDEVRA TGQLLSIPVG DALIGRVVDP LGNALDGRGP
IIAESSRPLE TTAPGVAARQ PVKQPMQTGI KAVDAMTPVG RGQRQLIIGD RKTGKTAVAI
DAIINQKGGD VICIYVACGQ RASSIGGVVE ALKAAGAMDY TIVVAAGASD PAPLQYIAPY
AGAAIAEYFM YQGKHTLVVY DDLSKQAVAY RQLSLLMRRP PGREAYPGDV FYCHSRLLER
AAKLSDELGG GSMTALPIIE TLEGEVSAYI PTNVISITDG QIYLEPDLFF AGVRPAINVG
ISVSRVGGNA QTKGMKKVAG SLRLDLAAFR ELEAFAQLGT ELDAATQKQV DRGYRMVELL
KQPQYVPLAA ADQIVSIYAG TRGYFDSVPV NQVAEAEKQL LEYVRLEHAA FRENLISSKT
LDDAQEAQLK TILEGFKKRW QPK
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