Gene Plim_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0172 
Symbol 
ID9136826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp226971 
End bp227687 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content53% 
IMG OID 
ProductATP synthase F0, B subunit 
Protein accessionYP_003628223 
Protein GI296120445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.173699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGCTC AAGCTTGCCA AGTGACATTC CAGTCCTCGA CAGCCCGTCG TTCTGGCTGG 
TTGTGGAGCC TTTGTTTTTG TGCGATGGCT GGGCTTTTGC TTCAGGGATC GATTTCGGTT 
GCTGATGAAA AAGCCAAGCC AGATCACGGC TCGGAAACGG CTTCAACGAC CGGACATGGT 
CACTCAGAAG ACGCTCACAG TTCACAGGGA TCGACCATCC CCTCAGGTAT GATTCCAAAA 
CCTGACTTGA TGGTCTGGTC GCTGATCACG TTTGTGGCCT TTGTCTTTCT GCTCAGTAAG 
TTTGCCTGGA AGCCCTTGGC AGCTGGTCTT GATCAACGCG AAGCACGCAT TCGCAACGAT 
ATTCAAGAAG CCGAATCCGC TCGGCTGAAA GCCCAGCAAC TTCTGGCTGA GCATGAAGCC 
CGGCTGGCAA AGACGGAAGA GACAGTGCGT GAGTTGATTG CAGAAGCCAA GCGCGATGCC 
GAAAAGGTTC GAGTCGATTT GACAGCTGCT GCTGAAGCGG ATGTTCAAAC GATGAAGAAA 
CGGGCAGTTT CTGAAATCGA GCAGGCTCGC GATGTCGCCT TGCAGCAACT CTTCGACACA 
CTTTCGACAC ACGTCATGGA TGCGACCAGC CGCATTGTGG GGCGCAGTTT GAATAGTGAT 
GATCATCAGC GTCTGGTTCA GGAAGCTCTG GCTGAACTGA ATGTACGCAG AAATTGA
 
Protein sequence
MYAQACQVTF QSSTARRSGW LWSLCFCAMA GLLLQGSISV ADEKAKPDHG SETASTTGHG 
HSEDAHSSQG STIPSGMIPK PDLMVWSLIT FVAFVFLLSK FAWKPLAAGL DQREARIRND 
IQEAESARLK AQQLLAEHEA RLAKTEETVR ELIAEAKRDA EKVRVDLTAA AEADVQTMKK 
RAVSEIEQAR DVALQQLFDT LSTHVMDATS RIVGRSLNSD DHQRLVQEAL AELNVRRN