Gene Plim_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0158 
Symbol 
ID9136812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp210346 
End bp211473 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content55% 
IMG OID 
Producttetraacyldisaccharide 4'-kinase 
Protein accessionYP_003628209 
Protein GI296120431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.216218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGT CGTGGATCCA TGGTGTGCAA TCGGGAGCAG ATCGCTCTTT GCGAGCGAGG 
TTGCTGCGTA GCTGCTTGTG GGTTCTGAGC CTCGGTTATG GGTTTGTCGT GCTGTGCCGC
AATGTGGCTT ATCAGACGGG CTGGCTGCGG AGCCGGCGAT TACCGGCCTT TGTGGTGAGT
GTGGGGAACA TTACGACGGG AGGAACGGGA AAAACGCCTC TCGTGGGCTG GGTGGTGCAG
GCCCTGCATG AACTTCTGCT GAGTGAAAAA CCCGACAACC AGGCGCAAAT CGCGATTTTG
AGTCGAGGTT ACGGAGCCAC CCAAGCAGGA TCGAATGACG AAAAAGCTGT GCTTGACCGG
ATCTGCCCCG GTGTCCCTCA CCTGCAGAAT CGGCAGCGGG CGAGAATTGC CGCCGAATGG
TTGGCCTCGC TTCTTCCGGC TCAAACTCTG AAGAGGCCCG CCATTGTAGT CGATGATGGC
ATGCAGCATC GTCAACTGGC CCGTGATGTC GAACTGGTCG TCATCGACGC CACTCACCCG
TTTGGATACG GCTATCTGTT GCCGCGAGGG ATGTTGCGTG AACCACTTTC TCAATTGATG
CGTGCCGACT GGTTTCTGGT CACTCGCAGC GAGATGGTGA GTCAACAACA ATTGAGCAGC
CTGCGGGAAA AGCTTCTGAA GTTTGTGCCC GAGGATCGCA TTCTGGAGGT CGAATTTCGC
CCCTCGCGAT TGATCAATAT CCAAGGCGAG ACGAGATCGC TTTCGGATTT GGAATCGGTG
GCTTATCTGC CATTCTGCGG CATCGGCAAT CCGACAGGCT TTGTGCAGTT GCTCAAGCAT
TGGTTGCCTG CAGCCAGTGC GCAAATGAAG GGCACACTTC AGATTTTTGA TGACCACCAT
CACTATACTC CACCAGATCT CGATGAACTG GGACTGCTCG CCAATGCCCA TGGGGCCCGG
TGGCTGCTGA CAACCATGAA AGACCTTGTG AAAATTCCAC AAGCTTCGAG CCATGGTGTG
GAGTTCTGGG CCGTCGAGAT TGCGCCACAC TTCCGGGAAG GTGACGAACG ATTACGGCAA
TATCTCAAAG ATCGTTATGA GTCTCTCAAT CGATCGCTGG TGGATTGA
 
Protein sequence
MNLSWIHGVQ SGADRSLRAR LLRSCLWVLS LGYGFVVLCR NVAYQTGWLR SRRLPAFVVS 
VGNITTGGTG KTPLVGWVVQ ALHELLLSEK PDNQAQIAIL SRGYGATQAG SNDEKAVLDR
ICPGVPHLQN RQRARIAAEW LASLLPAQTL KRPAIVVDDG MQHRQLARDV ELVVIDATHP
FGYGYLLPRG MLREPLSQLM RADWFLVTRS EMVSQQQLSS LREKLLKFVP EDRILEVEFR
PSRLINIQGE TRSLSDLESV AYLPFCGIGN PTGFVQLLKH WLPAASAQMK GTLQIFDDHH
HYTPPDLDEL GLLANAHGAR WLLTTMKDLV KIPQASSHGV EFWAVEIAPH FREGDERLRQ
YLKDRYESLN RSLVD