Gene Plim_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0157 
Symbol 
ID9136811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp209587 
End bp210339 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content51% 
IMG OID 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 
Protein accessionYP_003628208 
Protein GI296120430 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.335039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAT GGATTTTCTT CGACATTGGA AATGTCCTTT TCAATGACGA TCAGCAGGCT 
TTTTTTGGCT ATTTGTCATT GTTTGAGGCC TTGCGGGAAA CCAATCCTCA GCAGACATTC
AGCGAGTTAA TGTCGGCCCG TGAAGCCGAA GCGAAGCGTG GCCAGCAATG GATCATCTCA
CGTCTCGCAA AGTCCCGCCT CACTCCTGAG CGCTACTCGA CCTGGAGTCA GTATGTTTCG
AACGAGCTGA GAAATCGCTA CGACGAATTT CATCTGCTCA ACCCGCATGC CTTCGAGATG
TTGCAGGAAT TGCGTGCTCA GTACAGGCTG GGAATCATTG CGAACCAGAC GACAGCCTGC
CGGCCCTCTC TCGAACGGCG CGAATTGATG GAGTATTTCG ATCTGATTGG TATCAGTGAT
GAACTGGGAT GCTCCAAGCC TGATCGCCAG ATCTTTGAGT GGGCATTAAA TGAAGCTGGT
TGTCATCCGG GCGAATCTCT CATGATTGGT GATCGAGTCG ATAACGACAT GCTTCCTGCC
AGTGAACTGG GGATGCAGGG ACTCCTGGTT CACTGGAGTT CATTCGAGCG AAAGCTCTGG
CAGCCACAGG ATCGACTCGC CCGGGAGTTT CTGGCATCAT GCACAAATGT GCCATTGTTC
CCGCATGGAC TGGTTGATTT TGATCGATAC CCTTGTGTGA ACAATCTCGG CGAGATTCCC
GAGAAGATCG CTGAAATGGA GCAATCTGTC TGA
 
Protein sequence
MLKWIFFDIG NVLFNDDQQA FFGYLSLFEA LRETNPQQTF SELMSAREAE AKRGQQWIIS 
RLAKSRLTPE RYSTWSQYVS NELRNRYDEF HLLNPHAFEM LQELRAQYRL GIIANQTTAC
RPSLERRELM EYFDLIGISD ELGCSKPDRQ IFEWALNEAG CHPGESLMIG DRVDNDMLPA
SELGMQGLLV HWSSFERKLW QPQDRLAREF LASCTNVPLF PHGLVDFDRY PCVNNLGEIP
EKIAEMEQSV