Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0137 |
Symbol | |
ID | 9136791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 185434 |
End bp | 186696 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003628188 |
Protein GI | 296120410 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0222229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCCA TCGCTGATGA GGAACAAGTC GAAACACGTT CGGCCCCGAT GTTGAGGCGG ATTGAAACCC GCTCGATCTC GCTGCTGACG ATTGGGCATG CCACGGTGGA TCTCTGCCAG GGGCTTGTCC CGGCGATGGT TTCGTACCTG GTGCTCAAAG AAAACTACAC ATACTTCATG AGTGCCTCGC TGGTCTTTGC CACTGCAGCG ATGTCGTCGA TTGTGCAGCC TGTTTTTGGG CAGATGGCCG ACCGTTTGAA GCTTCATTGG CTGCTTCCTG CGAGTGTGTT GCTGGCCGGA ATTCCTTTGG GAATAGGGGC ACAAAGCCCC AGTTATGGAT TGTTGCTCTT TGCACTGGCA CTGAGTGGTT TCGGAATTGC GGCCTTTCAT CCGGAAGCAG CGAGGCAAGC TCATCTGGCG GCGGGCGATT ATCGCACCAC CGCGATGAGT TACTTTTCGC TGGGTGGTAG TGTGGGGTTT GCCATGGCTC CGGCCCTCGG CTGGTGGCTG CTCGAATCGA GTGGAAGGCT GGGGATGCTG TGGGTCATAC TCCCTGCAGC TATTGTGGCA GCACTGTTGG CCCGGCAGTT CTCGATGTCT GCTTCGCCGT CGAGACAACG GCCACATATA GCGATTGCCC CAGCGAAAGA CGATTGGTAC GGCTTTGGCG TACTGACCAT CAGTGTCGTA GCGCGTTCGA TTGTGTTCTT TGCGATCAAT ACCTTTCTGG CACTTTACTG GCGGCAGCGC TGGGCGGATT CAGCCGACGT GGGGAGCACA GGGGCGTTCG ATCTCAATGT GATCCTGGCT TCGGGCACAA CGATCTTATC GGTCTTTCTG GCAGCTGGAA TTGGTGGCAC AATTCTCGGA GGCTGGTTTG CCGACCGGTT CAGCCGCAGA GCCACGTTGA TCACCGGCTT CGGGTTGTCG ATGCTGACAT TTCCCCTGAT GGTCTGGTCG CCATCGATGG AGGTAGGAGC TGCGATGGTC GCTTTGACGG CGATCCTGTT TTTCGCACCG GCCAGTCCCG CCGTGGTGCT GGGTCAGGAG TATCTGCCGA ACCGGGTGGG CATGGCTTCC GGAGTGACCA TTGGCCTGGC GGTAAGTGTG GGTGGCATGG TTGTCCCTCT CTTAGGTTGG CTGGGCGACG TTTATGGGCT GGGTGTGGTG TTTCTGCTGA TGGAAGTGAT GCTTGGTTTC TGCGTAGTTT CGTCGATCGC ACTGCCAAAT CCACATTTCA GCACACGACT CGCGAAGTCG TAA
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Protein sequence | MISIADEEQV ETRSAPMLRR IETRSISLLT IGHATVDLCQ GLVPAMVSYL VLKENYTYFM SASLVFATAA MSSIVQPVFG QMADRLKLHW LLPASVLLAG IPLGIGAQSP SYGLLLFALA LSGFGIAAFH PEAARQAHLA AGDYRTTAMS YFSLGGSVGF AMAPALGWWL LESSGRLGML WVILPAAIVA ALLARQFSMS ASPSRQRPHI AIAPAKDDWY GFGVLTISVV ARSIVFFAIN TFLALYWRQR WADSADVGST GAFDLNVILA SGTTILSVFL AAGIGGTILG GWFADRFSRR ATLITGFGLS MLTFPLMVWS PSMEVGAAMV ALTAILFFAP ASPAVVLGQE YLPNRVGMAS GVTIGLAVSV GGMVVPLLGW LGDVYGLGVV FLLMEVMLGF CVVSSIALPN PHFSTRLAKS
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