| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0111 |
|---|
| Symbol | |
|---|
| ID | 9136765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 153301 |
|---|
| End bp | 154728 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003628163 |
|---|
| Protein GI | 296120385 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.480309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCTG CGAATTCACC ATCCGCTAAT CATGCTTCCG GCACATCACA ACCGCCCCGT
TCGAATTCAG TGGTCAGTCG CCGCGATGTC CTGAGAGCCA CGGGAGCATT GGCGACGACA
TCGATGATTG CGAGCATGGC GATCCCGCAG ACGGTTTATG CTGGTGAAGA CAATACGATC
AAGGTGGCGC TGGTGGGCTG CGGTGGACGT GGAACCGGTG CGGCAGCCAA TGCTCTTTCA
GTGAAGAATC AAGGGCCTAT CAAGCTCGTC GCAATGGCCG ATGTCTTCCC CAATCGACTG
AACAGCAGTT ACGAGGGACT CAAAGGTCAG TTCAAAGATC AGGTCGATGT GCCGGAAGAT
CGAAGATTCG TGGGCTTTGA GGCTTACAAG CAGGCCATCG ATTGCCTCTC GCCCGGCGAT
GTCGTGATTA TGGCCACGCC TCCCGCCTTT CGCTGGGTAC AGTTCACCTA CGCAATTGCC
AAGGACGTGA ACACGTTCAT GGAAAAGCCC GTGACCGTGG ATGGCCCTTC CACGAAGCGT
ATGCTGCAAC TGGCCGATGA ATCCGAAAAG AAGAATCTCA AGGTTGGTGT CGGCCTGATG
TGCCGGCACT GCGATGCCCG CGGCGAGCTG TTCAAGCGGA TTCAGGATGG TGAGATTGGT
GACCTGCTGC TGCTGCGGGC TTATCGTATG GCCGGTCCTA CCGCGACTGC CTTTGCGAAA
AAGAAGCCGG AAAATCAGAA GGAACTGATG TACCAGATCC AGAATTTCCA TGCCTTCCTC
TGGGCCTCTG GGGGCGGCTT CAGCGACTTC CTCATTCACA ACATTGACGA GTGCTGCTGG
ATGAAGAATG CCTGGCCAGT GAAAGCCCAG GCAACGGGTG GACGTCACTT CCGCGGCGAT
TATGTCGATC AGAACTTCGA TCAGTATGCC GTGGAGTACA CCTTTGCTGA TGGCACGAAA
CTGTTGATGG AAGGCCGCAC TATGCCCGGC TGCCATCAGG AGTTCGCCAG CTATGCCCAT
GGCTCGAAGG GTTCTGCTGT GATTTCGCAA TCAGGCCATG CTCCTTCGCG TGCCCGCACA
TACAAGAGCC AGGATATGTC CAGCAAGGAT AACATTCTCT GGCAATTCGG GGCGAAAGAG
CCGAGCCCTT ACCAGCTCGA ATGGGATCAT CTGGTGGAAG CCATTCGTAA AGATCGACCT
TACAATGAGG TTCGACGTGG TGCGGAAGCC AGTCTGGTGA CCTCGATGGG GCGTATGGCA
GCTCACACCG GGCAGGTCAT CACCTACGAT GCCATGCTCA ACTGTGATCA CGAATTCGCA
CCGAACGTCG ACTCTCTCAC AGAAGATGGC CCAGCTCCCG TAGTGGCCGA CGCCGAAGGC
AAGTATCCAG TTCCGATGCC AGGTCTGAAG ACAACTCGCG AGTATTAA
|
|---|
| Protein sequence | MNPANSPSAN HASGTSQPPR SNSVVSRRDV LRATGALATT SMIASMAIPQ TVYAGEDNTI
KVALVGCGGR GTGAAANALS VKNQGPIKLV AMADVFPNRL NSSYEGLKGQ FKDQVDVPED
RRFVGFEAYK QAIDCLSPGD VVIMATPPAF RWVQFTYAIA KDVNTFMEKP VTVDGPSTKR
MLQLADESEK KNLKVGVGLM CRHCDARGEL FKRIQDGEIG DLLLLRAYRM AGPTATAFAK
KKPENQKELM YQIQNFHAFL WASGGGFSDF LIHNIDECCW MKNAWPVKAQ ATGGRHFRGD
YVDQNFDQYA VEYTFADGTK LLMEGRTMPG CHQEFASYAH GSKGSAVISQ SGHAPSRART
YKSQDMSSKD NILWQFGAKE PSPYQLEWDH LVEAIRKDRP YNEVRRGAEA SLVTSMGRMA
AHTGQVITYD AMLNCDHEFA PNVDSLTEDG PAPVVADAEG KYPVPMPGLK TTREY
|
|---|
| |