Gene Plim_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0101 
Symbol 
ID9136755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp138889 
End bp140169 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content59% 
IMG OID 
ProductFAD dependent oxidoreductase TIGR03364 
Protein accessionYP_003628153 
Protein GI296120375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTCTTG ATCTGACCAC GACCATGCCA TCTGCCGACC ACACCGACTT CAGCCCGAAG 
TCAGCCGACA CCTCCGGGCC CACCTTTGAT GACATTGTCG TCGGGGCTGG TGTGATTGGT
CTGGCACATG CCTACGCTCT GGCACGTCGC GGCCGCAAGG TGCTGGTCAT CGAGCGGCAT
GCCCGGGCCT TGGGCGCCTC AGTTCGCAAC TTTGGAATGA TCTGGCCGAT TGGCCAGACC
TTAGGCACGA ACATGAACCT GGCCCTCGAC AGTCGCCAGA TCTGGGCCGG AGTGCTGGAA
CGATCGGGGA TCTGGCATCA CCAGGGGGGC TCGCTGCATG TGGCTCATCA CGATGATGAA
GCTCAGGTAT TGCGCGAGTT TTACGAACTA GCGACGCAGG CTGGCTATGA ACTAGAACTG
CTGGATGCGC GGGCGACGAC CGCCTGCTCA CGGGCCGTCA ATCCAGAGGG ACTCAAACTT
TCGCTTTACA GCCGGCATGA GATTGCTGTC GATCCGCGCG AGGTCATTGC GAAACTGCCA
GGCTATCTGC GAGCCCACTA CGGCGTGCGA TTTGAGTATG GCCAGATGGT GCGTTCCATT
GATGGACAGA AGGTCAAGAC GTCTGCAGGC CAATGGTCGG CCCGGCGCGT CTGGCTCTGC
ACGGGTGATG AAACACAGAT TCTGTACCCT GAGATTTTGA CCCGGCAAGG GATGTTCCCC
TGCAAACTGC AGATGCTCCG CACCGCGGCT CAAACGGGCG ATTGGAAAAT CGGGCCACAC
CTGGCTGGTG GACTGACACT CCGGCACTAC ACATCGTTTG CAGCCTGCCC GACACTCGCC
GAACTCAAAG CGCGAGTGGC CCGAGAAATG CCTCTGATGG ATCACTTTGG AATTCATGTG
ATGGCTTCGC AGAATGGGCG TGGCGAACTC ACGATTGGTG ATTCGCACGA ATACAACCCG
CCCGAAGAAC CCTTCGGCAC CGTCTCGCCA TTCAATACCC GGCAGATCGA CGACCTGATC
ATGAGCTATC TGAAAACCAT CATGGTCGCA CCCGATCTGG AGATTGCCGA GCGCTGGTTC
GGAGTTTATC TGAAGCACCC CGGCAAGCTG TGGTTTGAAG CCGCGGCCGA ACCACACGTC
GAAATCCTGA CCGGCATCGG TGGGAATGGC ATGACTCTCT CGATGGGTGT GAGCGAACAA
CATGTGGCCC GTGTGCTCGG AGAAGCAATC ACTCAGGATG CGACTCCAGC CGATGCCAGT
ACGAAACCAG CACTGGTGTA G
 
Protein sequence
MTLDLTTTMP SADHTDFSPK SADTSGPTFD DIVVGAGVIG LAHAYALARR GRKVLVIERH 
ARALGASVRN FGMIWPIGQT LGTNMNLALD SRQIWAGVLE RSGIWHHQGG SLHVAHHDDE
AQVLREFYEL ATQAGYELEL LDARATTACS RAVNPEGLKL SLYSRHEIAV DPREVIAKLP
GYLRAHYGVR FEYGQMVRSI DGQKVKTSAG QWSARRVWLC TGDETQILYP EILTRQGMFP
CKLQMLRTAA QTGDWKIGPH LAGGLTLRHY TSFAACPTLA ELKARVAREM PLMDHFGIHV
MASQNGRGEL TIGDSHEYNP PEEPFGTVSP FNTRQIDDLI MSYLKTIMVA PDLEIAERWF
GVYLKHPGKL WFEAAAEPHV EILTGIGGNG MTLSMGVSEQ HVARVLGEAI TQDATPADAS
TKPALV