| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0047 |
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| Symbol | |
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| ID | 9136700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 62730 |
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| End bp | 63809 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_003628099 |
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| Protein GI | 296120321 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGCCAG TCAACCTGGG GCCACGCAGC TATCAGGTGC GGATTGGTGC GGGGTTGTCG
AAGCAAGTGG CCATTGAGTT GGGCAATCCT GGATCGGCTC TGGTGGTTTC CGATACGAAT
GTGGCTCCAT TGGCTGCTGA GAACTTGACT CAACAACTGG CTGAGGCTGG CTGGAATGTC
CGGCTGGCTG TGCAACCAGC GGGTGAGACA GCCAAGTCCT TGCGTGAAAT CGAAAAGCTC
TATGATCAGT TGATCGCCAT GCAGGCTGAT CGATCGACTC ATGTGATTGC CGTCGGTGGT
GGTGTGGTGG GTGATGCAGC GGGCTTTGCT GCTGCGACTT ATGCCCGTGG GCTCCCTTTC
ATTCAGGTAC CCACCACACT TCTGGCGGCT GTCGATAGCT CAGTGGGTGG CAAGGTGGGT
GTGAATCTGC CAGCTGCTAA GAACATTGTG GGGGCTTTTC ATCAGCCCAA AGCTGTCTTT
ATCGACACCG ATCTGCTGGC AACCTTGCCG CCGCGAGAGT TTGCCGCCGG TATGGCTGAA
GTCGTGAAGT ACGGCATGAT TCTCGATGAA AGTTTCTTTG ACTGGCTCGA AGCCGAACAG
CCTAAGATTC AATCGCATGA CCCCACCTTC CTGGCCCGGA TTATTCAGCG CAGTTGCGAA
CTGAAGGCCC AAGTGGTGGA AGCGGATGAG TTTGAAACGA CTGGTCTTCG AGCCGTGTTG
AATTTTGGTC ATACGTTCGG GCACGCTTAC GAAGCACTCG CGAAGTACGG CACACTGCTG
CATGGCGAAG CGGTTTCGAT CGGTATGATC GATGCTGCCA CACTCGCCTG TCAGTTGGGT
CGTATTCCGG AAGAAGTCGT CTCGCGACTG ACGAAACTGC TGCAATCGTT TCAACTCCCG
GTCTCACTTC CATCGGGAAT GAAACTCGAT CCACAACAGA TCATTGCTAC CATGCGGCTC
GACAAGAAAT CGGTCGGTGG CAAACTGCGG TTGATTCTGC CGACGAGAAT TGGCCATGTC
GAAAGCGTGC GCGATGTATC TGAAGAACTG GTTCTCAAGA CAGTGGCCCG TCATGGCTGA
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| Protein sequence | MVPVNLGPRS YQVRIGAGLS KQVAIELGNP GSALVVSDTN VAPLAAENLT QQLAEAGWNV
RLAVQPAGET AKSLREIEKL YDQLIAMQAD RSTHVIAVGG GVVGDAAGFA AATYARGLPF
IQVPTTLLAA VDSSVGGKVG VNLPAAKNIV GAFHQPKAVF IDTDLLATLP PREFAAGMAE
VVKYGMILDE SFFDWLEAEQ PKIQSHDPTF LARIIQRSCE LKAQVVEADE FETTGLRAVL
NFGHTFGHAY EALAKYGTLL HGEAVSIGMI DAATLACQLG RIPEEVVSRL TKLLQSFQLP
VSLPSGMKLD PQQIIATMRL DKKSVGGKLR LILPTRIGHV ESVRDVSEEL VLKTVARHG
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