Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0001 |
Symbol | |
ID | 9140967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 614 |
End bp | 3166 |
Gene Length | 2553 bp |
Protein Length | 850 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | chromosomal replication initiator protein DnaA |
Protein accession | YP_003628053 |
Protein GI | 296120275 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCCG GCATGATGCT GGCGAACCCC GGAATCAATC ATGATGAACG AGATCAACAA CAGACAGTTC AGGCTCCCGC CGCCCAGGTA CGAGGCGTGC CACAGCTCAT ATCTCAGAAC GCCGATGGAC AGATTGAATC TGATGTTCAG ACCGCTGCTG AGCGGGCACG GCTCAATGAG GGTCTCGTCA GGCAGAATGC TCTGACTGGA CACCTTCCAG CAGAGCGTTT TCCAGTACAG CGTCATCCAG TACAGCATGC CGGGAAACAG CACTCTCTTC CCACGAGAGC CAAACTTCCG CAGGAAGCGG CTTCCTTAGG ATCTGTCCTG ATTAAGGCAG GTCTTTGTCA CGCCACTTCC AGCCGAACGA ACGGATCGCT GCAATCAGCA GATGACCGCG ATGTCTCTGT TTCGTCGATC GTTGCGAACC AGGCGCCTGT GAAACGATCC GCCGCCACGG CCAGTGTTTC GCCGGACCTG ACAAAGGGGG CACCGGATTC TGCCAAAGCA TTATTGTTCA ATACGGCACC AATATCTGAT GTAGGGGCCT TGCAGATCTT TCAAGAAGCA TTGATCGAGG CCATTGGGTC ATCTCGATAT GAGATGCTCT TTGCTCGAAA AGTCACTTTC GACTGGCAGC AAGTGGCGGC CACAACGTCT CATCATCAGG CGGGGCGACT GGTACTGCGA ATTGAAGACG AGTTCTTACG AAACTGGCTG AGGCGCGAAT ACCATCCCCT GCTGGAGCGA CTGGCTCGTG AGTGTCTGCA GGGAAGTACG ATTTTATTCA GTGAAGATGC GTCACTTGGT CAAAGCGTAT CCTCTGCGAA GATCACACCA TCTCACACGA CGGATCACCA AACAACGATA TCACGGAATC CCTCTGAAAA GATTTCCACA ACAAATACTG GAGTGATTGC ACAGCTTCCC GCACAGAATC ACATGCCTTC TCGGAACCCG AGAAAGTCGG CTGTCTCTGA CTTGAAGTTG GGAGCCACAA TCTCCACAAT CCCCTCCCCG GACCAACCGG CTGAGCATCA TGCAGCAGAT CAGTCTTCTG GTGCTGCTGA ACAGCGTATT GATAGACAGT GTGCCAACAA ACCAGGTGCC AACAAATCGT CGAGAGTTCT TCCAGTCAGT GATTTTCCGG GAGCCAATCT CGACGTGATG CAATCTGAAT CTGCCCATAA TCCTGCTTCC CAGAACCTGC CACTGGCTGC CACGCCCTTG GCCAAAAGCC AATTGGCGGC TGGGAATAAA GTCGCTGATG ATCAGGTTGT CGCCAGCGCA GCAGGCAGAA ATCCGCTGGT CTCTCAGATG GCAGGTCCTC GCCGGGGGGC ATATGTCGCA TCGACGGCCT TCGGATCAAC GAACCAAGTG CCAACGGCCC AGGCGCCAAC AAACCAGGCG TCTGGTTTCT CCTCAGCATC TCACGAATCT CGTTCCAATT CAGGAGCGGC ATCTCATCAT TCAGCTCCGG CTCATCTGGG GAGAACAAAC GCTGCGAAAA TGTCGCGTCG CCCGATGGAA CTGAGTGATC TCGTCGTCGG TACAGGGAAT GAACTGGCTC TGGCAGCGGC CCGCAAAGTT TGCGACGAAG TACCGGCTCC ATTCAATCCA CTCTATCTGT TTGGAAACGT GGGAATTGGC AAGACCCACC TGCTGGAAGG AATTTCCCGG CAATTGCGCA GGCAGCATCC CGGGCTCAAT GTACTGATGA TGACCGCCGA ACAGTTCGCC AACTGTTTTA CCCAGGCACT GCGTGACAAA ACGTTGCCTT CATTCCGGCA GAAGTTTCGC AATGTCGATG CTCTCCTCAT TGATGATGTG GATTTTCTCG ATAATACGCG GGTGATACGC GAAGAGTTTC TACATACATT TACCGAACTC GCAGAACGTG GACGGGCGAT TGTGCTGACG GCTGATCGGC ACCCTAAACT CCTCTCGAAA CTGGGGGATG AACTGGTCAC TCGGTTCATG TCAGGGCTGA TCTGTCGAGT GGAAGCACCT GATCAGGCCA CGCGTGAACG GATTGTGCAG ATGAAAGCGG CCCGTATGGG TACCGATATC AGTGAAGAAG CACTGATGTG GGTGGCGCAA AAATTCCGCA ACAATGTGCG GGAACTCGAA GGGGCTCTCA ACTGCCTCCA CACGTGGTAC ACAATGAGCG AACGGCGGGT CGGTCTGGCC ACGGCACGGC AGATTCTGGC CGACCTTGAG CGTGATTGTC TGAAGATCGT CAGGCTGACC GATATCGAGC AGACGATCTG TACGCTCTTT GGCGTGCGGC CTCGTGAACT GAAATCATCC AGCCGGGCCC GCACAGTGAG TCAGCCGCGA ATGCTCGCGA TGTTTCTGGC AAGAAAACAT ACGCAGTCAG CTTATCAGGA AATTGGCCAG CATTTTGGCG GGCGGAATCA CAGCACCGTG ATGGCTGCCG AGAAAAAAGT GGGCGAATGG CTCGATTCGA ACAGCGAGCT TCATCTGGGT GGACGAGACT GGAACATTCG CGAACTGATG GACACCCTCG AACAACAGCT TCTGGCCAGT TGA
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Protein sequence | MQPGMMLANP GINHDERDQQ QTVQAPAAQV RGVPQLISQN ADGQIESDVQ TAAERARLNE GLVRQNALTG HLPAERFPVQ RHPVQHAGKQ HSLPTRAKLP QEAASLGSVL IKAGLCHATS SRTNGSLQSA DDRDVSVSSI VANQAPVKRS AATASVSPDL TKGAPDSAKA LLFNTAPISD VGALQIFQEA LIEAIGSSRY EMLFARKVTF DWQQVAATTS HHQAGRLVLR IEDEFLRNWL RREYHPLLER LARECLQGST ILFSEDASLG QSVSSAKITP SHTTDHQTTI SRNPSEKIST TNTGVIAQLP AQNHMPSRNP RKSAVSDLKL GATISTIPSP DQPAEHHAAD QSSGAAEQRI DRQCANKPGA NKSSRVLPVS DFPGANLDVM QSESAHNPAS QNLPLAATPL AKSQLAAGNK VADDQVVASA AGRNPLVSQM AGPRRGAYVA STAFGSTNQV PTAQAPTNQA SGFSSASHES RSNSGAASHH SAPAHLGRTN AAKMSRRPME LSDLVVGTGN ELALAAARKV CDEVPAPFNP LYLFGNVGIG KTHLLEGISR QLRRQHPGLN VLMMTAEQFA NCFTQALRDK TLPSFRQKFR NVDALLIDDV DFLDNTRVIR EEFLHTFTEL AERGRAIVLT ADRHPKLLSK LGDELVTRFM SGLICRVEAP DQATRERIVQ MKAARMGTDI SEEALMWVAQ KFRNNVRELE GALNCLHTWY TMSERRVGLA TARQILADLE RDCLKIVRLT DIEQTICTLF GVRPRELKSS SRARTVSQPR MLAMFLARKH TQSAYQEIGQ HFGGRNHSTV MAAEKKVGEW LDSNSELHLG GRDWNIRELM DTLEQQLLAS
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