Gene Snas_6413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6413 
Symbol 
ID8887639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6767702 
End bp6768478 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content68% 
IMG OID 
Productapurinic endonuclease Apn1 
Protein accessionYP_003515122 
Protein GI291303844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG GATCCCACGT TGACGCCAGC AGCCCACTGG ACGAGGCCGC CAAGCGCGGC 
GCCGAGGTGG TGCAGTTCTT CATCGGCGAT CCGCAGGGCT GGAAGAAACC GGAGTCCCGG
CCCGACGCCG AGGCGCTGCG GGCCAGCGAC GTCGACATCT TCGTGCACGC GCCCTACGTC
ATCAACGTCG CCTCGCCGAA CAACCGGATC CGGATCCCGA GCCGCAAGCT GCTGCTGCAA
CAGGCGCGGG TGGCCGCCGA GATCGGCGCC AAGGGGCTGA TCGTCCACGG CGGGCACGTG
ACCAAGGACG AGGACATGGC CGTCGGCTTC GCCAACTGGC GCAAGGCCTT CGAGTTCGGG
GCCGACCAGG GTGGCTTCGG GCTGCCGATC CTCATCGAGA ACACCGCGGG CGGCGACAAG
GCCTGCGCCC GCCGCCTGGA GAACATCGAG CGGCTGTGGG AGGCGGTGGG CGACTTCGAT
CCCGGCTTCT GCCTCGACAC CTGTCACGCC CACGCGGGCG GCCTGGACCT GTCCGATGTG
GTCGACCGTG CCAAGGCCAT CACGGGACAC ATCGACCTGA TCCACGCCAA CGATTCCCGC
GACACCTTCG ACTCCGGCCG CGACCGTCAC GCCAACCTCG GCGCCGGGCA CATCGACCCT
CAGCGAATTG TCGATATCAT CTCGGCTGCG AGGTGTCCGG CGGTCGTGGA AACACCCGGC
GACGCCGAGG CGCAGTCGGC AGATATCGCA CTGATCCGGG AGCACCTGAA GACATGA
 
Protein sequence
MRIGSHVDAS SPLDEAAKRG AEVVQFFIGD PQGWKKPESR PDAEALRASD VDIFVHAPYV 
INVASPNNRI RIPSRKLLLQ QARVAAEIGA KGLIVHGGHV TKDEDMAVGF ANWRKAFEFG
ADQGGFGLPI LIENTAGGDK ACARRLENIE RLWEAVGDFD PGFCLDTCHA HAGGLDLSDV
VDRAKAITGH IDLIHANDSR DTFDSGRDRH ANLGAGHIDP QRIVDIISAA RCPAVVETPG
DAEAQSADIA LIREHLKT