Gene Snas_6412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6412 
Symbol 
ID8887638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6765528 
End bp6767705 
Gene Length2178 bp 
Protein Length725 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003515121 
Protein GI291303843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCTG AAGACGCCAG CCGGTCCGCG GCCAACACCG TGACCCCCGG CGACGGCGCC 
GAGCCGCCAG CAGCGGACAC CCCCGCCCCG ACCCCCGACA CCCCAGCGGC CGAACCGGCG
AAGACCCCGG CGGCCAGGAC CGCCGAACCC GACGCGGACG TCCTCGCCGC CGAACCCGCC
GTCGGCGAGC CGTCGAACGC CGTGACGGCC GAGACGCCGT CCGTCGACGA CGCGGCCGAG
CCGACGGACG ATGCCCCGGC CGAGAGCCCA GCCGCGTCCG ACGCCGCCGC CGTCGATCCC
GAGGCCGACA CGCTGGAGAC GACGGCCGTG GACGGCACCG AGGCGGAGCC CGCCGACCCC
GAGGTCGGGC GCTGGCGCCG GTTCGCCGCC ACCGAACCGA CCGCCGAGCC GGAACCCGCC
GCGTGGCCGC GGCGGGCACT GCGTCGCACC GGCACGGCAC TGCGCGGCGA GAACGCCATC
GCCGCGATGG TCAGCGTGGT GCTCACGCTC GCGATGAACT GGAAGGTGCT GCGCGACCCG
CTGCACTCGA TCCCGCACGA CCTCGGCGAC CCGCTGTTGC AGACCTACAC GCTGGCGTGG
CCCGGTTCGG TGCTGTTCGA CGATCCCGGT CAGCTGTGGA ACGCCAGCAA CTTCTATCCG
AACCGGCTGT CGTTCGCGTT CACCGACACG CTGCTGGGCT ACCTGCCCGC GTCGCTGATC
GGTACCGGCC ACGAGGCCGC GCTGCTGCGC TACAACGTCC TGTACCTGTT CACCTTCGCG
CTGGCGTTCT TCGGCTGCTA CGTGCTGCTG CGGCAGCTGG GCGCCCGGGT CGCCGGTTCG
GCCATCGGCG CCGCCGCCGT CGCCTACGCC CCGTGGAAGC TGGCCCAGGC CGGGCACCTG
CACATCCTGT CCATCGGCGG CATCGCGCTG TCGCTGGCGA TGCTGGCCCG GGGCCACGGC
TACTCACTGC GGCACGGCTA CCGCGCCGAG CGCACCAAGT GGGGCTGGGT CATCGGCGGC
TGGCTGGTGG CGGCCTGGCA GGTGAGCATC GGTTTCGGCG TCGGGGTCGG CTTCGGCTAC
CTGCTGGGCG GCATCGTCGT CGTGTCGATG CTGATCTTCG CGGGCAAGAA CGTCATCGCC
TCGCTCAACA AGCGCATCGG GCCGCGCATC CCGTGGCGGG TGCTGGTGGC CGACCTGGTC
GGCATGCTGG CCTTCGCCGG GATCAGCCTC GCGCTGGCCA TCCCGTTCTT CCAGGTGCTC
AAGGAACACC CCGAGGCCGA ACGCTCCCTT GAGGAGGTCG GATTCTTCTC GCCGGTGTGG
TCGAGCTTCC TGATCAGCCC CGAGGAGTCG GCCGTGTGGG GCGAGGCCCA CGCCGGTGCC
CGCGAGGGCA TGCCCTGGCC GCCCGAGACC ACGCTGTTGG TCGGCTTCAC CGTGCTGGCA
CTGGCCATCG TCGGCCTGAT CTGGTCGACC TGGACGCCGC GGCAGCGGGC GTTCCTGGCG
CTGGGCACCA CCGTGTCGGT GGCGCTGGCG CTGGGCACCA ACTTCCTCGA CAAGGGCGCC
TGGGCCTACG GCCTGGCCTA CGAGTACCTG CCCGGCTTCG ACGGCCTGCG CACCCCGGGA
CGGCTGGTGT TCTTCACCAG CCTGTTCCTG TCGATACTGG CCGCGGGCAC CCTGACCCGG
CTGGCCGACC AGCTCGACAG TTACGCCACC ATGGACCGTG TCGACACCCG GTTCCGCGCC
GCGGTCCCGG CCCCGCTGCG GGTGGCGCTG CTGCTGCCGT TGCTGCTGGT CCTCGCCGAG
GGCTACAGCG CCGCCGAGGT CAAAAAGGTC CCCGAGCCGC CGGTCGCGAT GTCCCAACTG
GCCGAACCGG TGCTGATCCT GCCGTCCGAC GGCTGGCACG ACTCGATGAT CCAGTACTGG
AGCGTCGACG GCTTCCCGCG CATCGTCAAC GGCACCGCCG GTTTCACACC CACCAATCAG
GACGAGATCC GGCAGCACGC GCTGACCTTC CCGTCCGAGA AGAGCGTCGC CGACCTGCGC
GCCGACGGCA TCAAGACCGT GGTGGCGGTG CGGTCGCTGC TGGAGGGCAG CCAGTGGGAC
TACCTGCAGG ACATACCCAG CCGCGACTCC ACCATCACGG TGGAGGACCG GGGGGCGGTG
CTGATCTTCA CGCTGTGA
 
Protein sequence
MSSEDASRSA ANTVTPGDGA EPPAADTPAP TPDTPAAEPA KTPAARTAEP DADVLAAEPA 
VGEPSNAVTA ETPSVDDAAE PTDDAPAESP AASDAAAVDP EADTLETTAV DGTEAEPADP
EVGRWRRFAA TEPTAEPEPA AWPRRALRRT GTALRGENAI AAMVSVVLTL AMNWKVLRDP
LHSIPHDLGD PLLQTYTLAW PGSVLFDDPG QLWNASNFYP NRLSFAFTDT LLGYLPASLI
GTGHEAALLR YNVLYLFTFA LAFFGCYVLL RQLGARVAGS AIGAAAVAYA PWKLAQAGHL
HILSIGGIAL SLAMLARGHG YSLRHGYRAE RTKWGWVIGG WLVAAWQVSI GFGVGVGFGY
LLGGIVVVSM LIFAGKNVIA SLNKRIGPRI PWRVLVADLV GMLAFAGISL ALAIPFFQVL
KEHPEAERSL EEVGFFSPVW SSFLISPEES AVWGEAHAGA REGMPWPPET TLLVGFTVLA
LAIVGLIWST WTPRQRAFLA LGTTVSVALA LGTNFLDKGA WAYGLAYEYL PGFDGLRTPG
RLVFFTSLFL SILAAGTLTR LADQLDSYAT MDRVDTRFRA AVPAPLRVAL LLPLLLVLAE
GYSAAEVKKV PEPPVAMSQL AEPVLILPSD GWHDSMIQYW SVDGFPRIVN GTAGFTPTNQ
DEIRQHALTF PSEKSVADLR ADGIKTVVAV RSLLEGSQWD YLQDIPSRDS TITVEDRGAV
LIFTL