Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_6412 |
Symbol | |
ID | 8887638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 6765528 |
End bp | 6767705 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003515121 |
Protein GI | 291303843 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTCTG AAGACGCCAG CCGGTCCGCG GCCAACACCG TGACCCCCGG CGACGGCGCC GAGCCGCCAG CAGCGGACAC CCCCGCCCCG ACCCCCGACA CCCCAGCGGC CGAACCGGCG AAGACCCCGG CGGCCAGGAC CGCCGAACCC GACGCGGACG TCCTCGCCGC CGAACCCGCC GTCGGCGAGC CGTCGAACGC CGTGACGGCC GAGACGCCGT CCGTCGACGA CGCGGCCGAG CCGACGGACG ATGCCCCGGC CGAGAGCCCA GCCGCGTCCG ACGCCGCCGC CGTCGATCCC GAGGCCGACA CGCTGGAGAC GACGGCCGTG GACGGCACCG AGGCGGAGCC CGCCGACCCC GAGGTCGGGC GCTGGCGCCG GTTCGCCGCC ACCGAACCGA CCGCCGAGCC GGAACCCGCC GCGTGGCCGC GGCGGGCACT GCGTCGCACC GGCACGGCAC TGCGCGGCGA GAACGCCATC GCCGCGATGG TCAGCGTGGT GCTCACGCTC GCGATGAACT GGAAGGTGCT GCGCGACCCG CTGCACTCGA TCCCGCACGA CCTCGGCGAC CCGCTGTTGC AGACCTACAC GCTGGCGTGG CCCGGTTCGG TGCTGTTCGA CGATCCCGGT CAGCTGTGGA ACGCCAGCAA CTTCTATCCG AACCGGCTGT CGTTCGCGTT CACCGACACG CTGCTGGGCT ACCTGCCCGC GTCGCTGATC GGTACCGGCC ACGAGGCCGC GCTGCTGCGC TACAACGTCC TGTACCTGTT CACCTTCGCG CTGGCGTTCT TCGGCTGCTA CGTGCTGCTG CGGCAGCTGG GCGCCCGGGT CGCCGGTTCG GCCATCGGCG CCGCCGCCGT CGCCTACGCC CCGTGGAAGC TGGCCCAGGC CGGGCACCTG CACATCCTGT CCATCGGCGG CATCGCGCTG TCGCTGGCGA TGCTGGCCCG GGGCCACGGC TACTCACTGC GGCACGGCTA CCGCGCCGAG CGCACCAAGT GGGGCTGGGT CATCGGCGGC TGGCTGGTGG CGGCCTGGCA GGTGAGCATC GGTTTCGGCG TCGGGGTCGG CTTCGGCTAC CTGCTGGGCG GCATCGTCGT CGTGTCGATG CTGATCTTCG CGGGCAAGAA CGTCATCGCC TCGCTCAACA AGCGCATCGG GCCGCGCATC CCGTGGCGGG TGCTGGTGGC CGACCTGGTC GGCATGCTGG CCTTCGCCGG GATCAGCCTC GCGCTGGCCA TCCCGTTCTT CCAGGTGCTC AAGGAACACC CCGAGGCCGA ACGCTCCCTT GAGGAGGTCG GATTCTTCTC GCCGGTGTGG TCGAGCTTCC TGATCAGCCC CGAGGAGTCG GCCGTGTGGG GCGAGGCCCA CGCCGGTGCC CGCGAGGGCA TGCCCTGGCC GCCCGAGACC ACGCTGTTGG TCGGCTTCAC CGTGCTGGCA CTGGCCATCG TCGGCCTGAT CTGGTCGACC TGGACGCCGC GGCAGCGGGC GTTCCTGGCG CTGGGCACCA CCGTGTCGGT GGCGCTGGCG CTGGGCACCA ACTTCCTCGA CAAGGGCGCC TGGGCCTACG GCCTGGCCTA CGAGTACCTG CCCGGCTTCG ACGGCCTGCG CACCCCGGGA CGGCTGGTGT TCTTCACCAG CCTGTTCCTG TCGATACTGG CCGCGGGCAC CCTGACCCGG CTGGCCGACC AGCTCGACAG TTACGCCACC ATGGACCGTG TCGACACCCG GTTCCGCGCC GCGGTCCCGG CCCCGCTGCG GGTGGCGCTG CTGCTGCCGT TGCTGCTGGT CCTCGCCGAG GGCTACAGCG CCGCCGAGGT CAAAAAGGTC CCCGAGCCGC CGGTCGCGAT GTCCCAACTG GCCGAACCGG TGCTGATCCT GCCGTCCGAC GGCTGGCACG ACTCGATGAT CCAGTACTGG AGCGTCGACG GCTTCCCGCG CATCGTCAAC GGCACCGCCG GTTTCACACC CACCAATCAG GACGAGATCC GGCAGCACGC GCTGACCTTC CCGTCCGAGA AGAGCGTCGC CGACCTGCGC GCCGACGGCA TCAAGACCGT GGTGGCGGTG CGGTCGCTGC TGGAGGGCAG CCAGTGGGAC TACCTGCAGG ACATACCCAG CCGCGACTCC ACCATCACGG TGGAGGACCG GGGGGCGGTG CTGATCTTCA CGCTGTGA
|
Protein sequence | MSSEDASRSA ANTVTPGDGA EPPAADTPAP TPDTPAAEPA KTPAARTAEP DADVLAAEPA VGEPSNAVTA ETPSVDDAAE PTDDAPAESP AASDAAAVDP EADTLETTAV DGTEAEPADP EVGRWRRFAA TEPTAEPEPA AWPRRALRRT GTALRGENAI AAMVSVVLTL AMNWKVLRDP LHSIPHDLGD PLLQTYTLAW PGSVLFDDPG QLWNASNFYP NRLSFAFTDT LLGYLPASLI GTGHEAALLR YNVLYLFTFA LAFFGCYVLL RQLGARVAGS AIGAAAVAYA PWKLAQAGHL HILSIGGIAL SLAMLARGHG YSLRHGYRAE RTKWGWVIGG WLVAAWQVSI GFGVGVGFGY LLGGIVVVSM LIFAGKNVIA SLNKRIGPRI PWRVLVADLV GMLAFAGISL ALAIPFFQVL KEHPEAERSL EEVGFFSPVW SSFLISPEES AVWGEAHAGA REGMPWPPET TLLVGFTVLA LAIVGLIWST WTPRQRAFLA LGTTVSVALA LGTNFLDKGA WAYGLAYEYL PGFDGLRTPG RLVFFTSLFL SILAAGTLTR LADQLDSYAT MDRVDTRFRA AVPAPLRVAL LLPLLLVLAE GYSAAEVKKV PEPPVAMSQL AEPVLILPSD GWHDSMIQYW SVDGFPRIVN GTAGFTPTNQ DEIRQHALTF PSEKSVADLR ADGIKTVVAV RSLLEGSQWD YLQDIPSRDS TITVEDRGAV LIFTL
|
| |